RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 PDK1Q15118 436 aa12.12□□□□□ -0.47
PCNA-201ENST00000379143 USP39Q53GS9 565 aaKnown RBP12.12□□□□□ -0.47
PCNA-201ENST00000379143 CARD16Q5EG05 197 aa12.12□□□□□ -0.47
PCNA-201ENST00000379143 SEL1L2Q5TEA6 688 aa12.12□□□□□ -0.47
PCNA-201ENST00000379143 CCDC181Q5TID7 509 aa12.12□□□□□ -0.47
PCNA-201ENST00000379143 FAM46CQ5VWP2 391 aa12.12□□□□□ -0.47
PCNA-201ENST00000379143 Q6ZVU0 165 aa12.12□□□□□ -0.47
PCNA-201ENST00000379143 ASCL5Q7RTU5 278 aa12.12□□□□□ -0.47
PCNA-201ENST00000379143 CCNYQ8ND76 341 aa12.12□□□□□ -0.47
PCNA-201ENST00000379143 OR2AP1Q8NGE2 309 aa12.12□□□□□ -0.47
PCNA-201ENST00000379143 OR2A12Q8NGT7 310 aa12.12□□□□□ -0.47
PCNA-201ENST00000379143 SIPA1Q96FS4 1042 aa12.12□□□□□ -0.47
PCNA-201ENST00000379143 GDAP1L1Q96MZ0 367 aa12.12□□□□□ -0.47
PCNA-201ENST00000379143 MKRN2Q9H000 416 aaKnown RBP12.12□□□□□ -0.47
PCNA-201ENST00000379143 KCND1Q9NSA2 647 aa12.12□□□□□ -0.47
PCNA-201ENST00000379143 SEPT3Q9UH03 358 aa12.12□□□□□ -0.47
PCNA-201ENST00000379143 AMACRQ9UHK6 382 aa12.12□□□□□ -0.47
PCNA-201ENST00000379143 FCF1Q9Y324 198 aaKnown RBP12.12□□□□□ -0.47
PCNA-201ENST00000379143 NUP205Q92621 2012 aa12.12□□□□□ -0.47
PCNA-201ENST00000379143 PRR23AA6NEV1 266 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 C1QTNF3-AMACRE9PGA6 284 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 MATN3O15232 486 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 BNIP3LO60238 219 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 ZNF821O75541 412 aaPredicted RBP12.11□□□□□ -0.47
PCNA-201ENST00000379143 ZNF189O75820 626 aaPredicted RBP12.11□□□□□ -0.47
PCNA-201ENST00000379143 IGSF6O95976 241 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 ADH1BP00325 375 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 PRNPP04156 253 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 VAV1P15498 845 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 HSPA9P38646 679 aaKnown RBP12.11□□□□□ -0.47
PCNA-201ENST00000379143 FNTBP49356 437 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 DNA2P51530 1060 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 RPS14P62263 151 aaKnown RBP12.11□□□□□ -0.47
PCNA-201ENST00000379143 PPIDQ08752 370 aaKnown RBP12.11□□□□□ -0.47
PCNA-201ENST00000379143 SLC10A2Q12908 348 aaPredicted RBP12.11□□□□□ -0.47
PCNA-201ENST00000379143 HNRNPDQ14103 355 aaKnown RBP12.11□□□□□ -0.47
PCNA-201ENST00000379143 ZNF235Q14590 738 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 LBRQ14739 615 aaKnown RBP12.11□□□□□ -0.47
PCNA-201ENST00000379143 GRM3Q14832 879 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 TTC31Q49AM3 519 aaPredicted RBP12.11□□□□□ -0.47
PCNA-201ENST00000379143 HS1BP3Q53T59 392 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 ZNF569Q5MCW4 686 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 MARC1Q5VT66 337 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 HEATR6Q6AI08 1181 aaKnown RBP12.11□□□□□ -0.47
PCNA-201ENST00000379143 KIAA1324Q6UXG2 1013 aaKnown RBP12.11□□□□□ -0.47
PCNA-201ENST00000379143 LEKR1Q6ZMV7 388 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 ARHGAP36Q6ZRI8 547 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 C11orf74Q86VG3 221 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 TP53INP2Q8IXH6 220 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 STK40Q8N2I9 435 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 TTC13Q8NBP0 860 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 NETO2Q8NC67 525 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 ZBTB44Q8NCP5 570 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 TRIM44Q96DX7 344 aaPredicted RBP12.11□□□□□ -0.47
PCNA-201ENST00000379143 LRIG1Q96JA1 1093 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 OLFM3Q96PB7 478 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 PSKH2Q96QS6 385 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 FAM129BQ96TA1 746 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 CINPQ9BW66 212 aaPredicted RBP12.11□□□□□ -0.47
PCNA-201ENST00000379143 HEMGNQ9BXL5 484 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 TNKS2Q9H2K2 1166 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 MTG2Q9H4K7 406 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 ACTL7AQ9Y615 435 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 FRYLO94915 3013 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 HACD1B0YJ81 288 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 KCNK3O14649 394 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 MTSS1O43312 755 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 NEBLO76041 1014 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 MAP3K6O95382 1288 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 POP4O95707 220 aaKnown RBP12.11□□□□□ -0.47
PCNA-201ENST00000379143 PEX11BO96011 259 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 IL1BP01584 269 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 C5AR1P21730 350 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 CHRNA3P32297 505 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 NBL1P41271 181 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 MAPK8P45983 427 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 CSNK1DP48730 415 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 PXNP49023 591 aaPredicted RBP12.11□□□□□ -0.47
PCNA-201ENST00000379143 CCNHP51946 323 aaPredicted RBP12.11□□□□□ -0.47
PCNA-201ENST00000379143 NSUN2Q08J23 767 aaKnown RBP eCLIP12.11□□□□□ -0.47
PCNA-201ENST00000379143 CCDC15Q0P6D6 951 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 ZNF211Q13398 564 aaPredicted RBP12.11□□□□□ -0.47
PCNA-201ENST00000379143 XRCC4Q13426 336 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 LLGL1Q15334 1064 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 CYTH1Q15438 398 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 CST6Q15828 149 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 DCAF12L1Q5VU92 463 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 DPY19L3Q6ZPD9 716 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 KBTBD6Q86V97 674 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 CCDC13Q8IYE1 715 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 TEX26Q8N6G2 289 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 TMIEQ8NEW7 156 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 TFB1MQ8WVM0 346 aaKnown RBP12.11□□□□□ -0.47
PCNA-201ENST00000379143 MAML1Q92585 1016 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 ERLEC1Q96DZ1 483 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 PPP1R16AQ96I34 528 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 SPACA7Q96KW9 195 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 FERMT1Q9BQL6 677 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 HEPHQ9BQS7 1158 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 TLR10Q9BXR5 811 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms