RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 SEMA4BQ9NPR2 832 aaPredicted RBP11.84□□□□□ -0.51
DDR1-227ENST00000376570 TAS2R1Q9NYW7 299 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 COL2A1P02458 1487 aaPredicted RBP11.84□□□□□ -0.51
DDR1-227ENST00000376570 SCN1AP35498 2009 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 SPAG6O75602 509 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 SLC10A7Q0GE19 358 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 DDX39BQ13838 428 aaKnown RBP11.84□□□□□ -0.51
DDR1-227ENST00000376570 LRRC23Q53EV4 343 aaPredicted RBP11.84□□□□□ -0.51
DDR1-227ENST00000376570 LDLRAD1Q5T700 205 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 ANKRD23Q86SG2 305 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 PHTF2Q8N3S3 785 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 PIWIL2Q8TC59 973 aaKnown RBP11.84□□□□□ -0.51
DDR1-227ENST00000376570 RNF208Q9H0X6 261 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 NMUR1Q9HB89 426 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 TCF7L2Q9NQB0 619 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 KIAA1217Q5T5P2 1943 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 BPGMP07738 259 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 YWHAQP27348 245 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 GGT5P36269 586 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 ACVRL1P37023 503 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 PSEN1P49768 467 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 TBL3Q12788 808 aaKnown RBP11.83□□□□□ -0.52
DDR1-227ENST00000376570 MIPOL1Q8TD10 442 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 MTFMTQ96DP5 389 aaKnown RBP11.83□□□□□ -0.52
DDR1-227ENST00000376570 FAXDC2Q96IV6 333 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 LRGUKQ96M69 825 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 VCX3BQ9H321 246 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 DCLRE1BQ9H816 532 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 NMRK1Q9NWW6 199 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 LGALS13Q9UHV8 139 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 MBL2P11226 248 aaPredicted RBP11.83□□□□□ -0.52
DDR1-227ENST00000376570 SERPINB8P50452 374 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 MRPS35P82673 323 aaKnown RBP11.83□□□□□ -0.52
DDR1-227ENST00000376570 CDC42EP1Q00587 391 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 DBN1Q16643 649 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 TEX44Q53QW1 395 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 RBM20Q5T481 1227 aaKnown RBP11.83□□□□□ -0.52
DDR1-227ENST00000376570 TUBGCP3Q96CW5 907 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 HMCESQ96FZ2 354 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 QKIQ96PU8 341 aaKnown RBP eCLIP11.83□□□□□ -0.52
DDR1-227ENST00000376570 HNRNPABQ99729 332 aaKnown RBP11.83□□□□□ -0.52
DDR1-227ENST00000376570 C20orf27Q9GZN8 174 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 COG4Q9H9E3 785 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 HPS4Q9NQG7 708 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 VPS28Q9UK41 221 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 ATXN2Q99700 1313 aaKnown RBP11.83□□□□□ -0.52
DDR1-227ENST00000376570 SSC5DA1L4H1 1573 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 ARHGAP10A1A4S6 786 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 MANSC4A6NHS7 340 aaPredicted RBP11.83□□□□□ -0.52
DDR1-227ENST00000376570 GPR39O43194 453 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 TLR5O60602 858 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 TRIM13O60858 407 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 BAIAP3O94812 1187 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 MAPK10P53779 464 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 CREB5Q02930 508 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 RALGDSQ12967 914 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 ACAP1Q15027 740 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 FRA10AC1Q70Z53 315 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 NIPA2Q8N8Q9 360 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 RPL10LQ96L21 214 aaKnown RBP11.83□□□□□ -0.52
DDR1-227ENST00000376570 GCNAQ96QF7 691 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 GPR63Q9BZJ6 419 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 THAP1Q9NVV9 213 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 APPL1Q9UKG1 709 aa11.83□□□□□ -0.52
DDR1-227ENST00000376570 NR5A2O00482 541 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 TYROBPO43914 113 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 GKP32189 559 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 NR2C2P49116 596 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 INCA1Q0VD86 236 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 DPYSL2Q16555 572 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 NRF1Q16656 503 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 ALFQ53S48 1182 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 SEL1L3Q68CR1 1132 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 ANGPTL8Q6UXH0 198 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 BBS5Q8N3I7 341 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 DDI1Q8WTU0 396 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 SLCO2A1Q92959 643 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 CNBD2Q96M20 576 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 SLC39A3Q9BRY0 314 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 TMEM109Q9BVC6 243 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 ATP13A1Q9HD20 1204 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 ZMYM5Q9UJ78 669 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 TIMM22Q9Y584 194 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 LTBP3Q9NS15 1303 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 TRIP11Q15643 1979 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 KIF3CO14782 793 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 SNX2O60749 519 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 DAB1O75553 588 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 SERPINE1P05121 402 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 TAS2R39P59534 338 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 GHRHRQ02643 423 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 ARL13AQ5H913 290 aaPredicted RBP11.82□□□□□ -0.52
DDR1-227ENST00000376570 UBXN11Q5T124 520 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 GPR158Q5T848 1215 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 IFNL1Q8IU54 200 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 DCP1BQ8IZD4 617 aaKnown RBP11.82□□□□□ -0.52
DDR1-227ENST00000376570 ASIC4Q96FT7 647 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 PHACTR1Q9C0D0 580 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 FBXO5Q9UKT4 447 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 ANGPTL2Q9UKU9 493 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms