RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 CIB1Q99828 191 aa17.01■□□□□ 0.31
VARS-215ENST00000375663 DAPK2Q9UIK4 370 aa17.01■□□□□ 0.31
VARS-215ENST00000375663 PPM1HQ9ULR3 514 aa17.01■□□□□ 0.31
VARS-215ENST00000375663 PARNO95453 639 aaKnown RBP17■□□□□ 0.31
VARS-215ENST00000375663 DLGAP3O95886 979 aa17■□□□□ 0.31
VARS-215ENST00000375663 SLC2A4P14672 509 aa17■□□□□ 0.31
VARS-215ENST00000375663 PSMB9P28065 219 aa17■□□□□ 0.31
VARS-215ENST00000375663 JAG1P78504 1218 aa17■□□□□ 0.31
VARS-215ENST00000375663 MRPS5P82675 430 aaKnown RBP17■□□□□ 0.31
VARS-215ENST00000375663 UBAP2Q5T6F2 1119 aaKnown RBP17■□□□□ 0.31
VARS-215ENST00000375663 GK5Q6ZS86 529 aa17■□□□□ 0.31
VARS-215ENST00000375663 TCF12Q99081 682 aa17■□□□□ 0.31
VARS-215ENST00000375663 CLK4Q9HAZ1 481 aaKnown RBP17■□□□□ 0.31
VARS-215ENST00000375663 SEMA4BQ9NPR2 832 aaPredicted RBP17■□□□□ 0.31
VARS-215ENST00000375663 IMPAD1Q9NX62 359 aa17■□□□□ 0.31
VARS-215ENST00000375663 GALNT8Q9NY28 637 aa17■□□□□ 0.31
VARS-215ENST00000375663 EGFL7Q9UHF1 273 aa17■□□□□ 0.31
VARS-215ENST00000375663 PCDHB12Q9Y5F1 795 aa17■□□□□ 0.31
VARS-215ENST00000375663 NUP188Q5SRE5 1749 aa17■□□□□ 0.31
VARS-215ENST00000375663 CLDN5O00501 218 aa17■□□□□ 0.31
VARS-215ENST00000375663 LIMK2P53671 638 aa17■□□□□ 0.31
VARS-215ENST00000375663 RUNX1T1Q06455 604 aa17■□□□□ 0.31
VARS-215ENST00000375663 MOGSQ13724 837 aa17■□□□□ 0.31
VARS-215ENST00000375663 DDX39BQ13838 428 aaKnown RBP17■□□□□ 0.31
VARS-215ENST00000375663 CCDC85BQ15834 202 aaPredicted RBP17■□□□□ 0.31
VARS-215ENST00000375663 TTLL9Q3SXZ7 439 aa17■□□□□ 0.31
VARS-215ENST00000375663 MFSD14CQ5VZR4 134 aa17■□□□□ 0.31
VARS-215ENST00000375663 ITFG1Q8TB96 612 aa17■□□□□ 0.31
VARS-215ENST00000375663 EZH1Q92800 747 aaPredicted RBP17■□□□□ 0.31
VARS-215ENST00000375663 KCTD15Q96SI1 283 aaPredicted RBP17■□□□□ 0.31
VARS-215ENST00000375663 CHRAC1Q9NRG0 131 aa17■□□□□ 0.31
VARS-215ENST00000375663 STK39Q9UEW8 545 aa17■□□□□ 0.31
VARS-215ENST00000375663 FAM50BQ9Y247 325 aa17■□□□□ 0.31
VARS-215ENST00000375663 PPP2R3BQ9Y5P8 575 aa17■□□□□ 0.31
VARS-215ENST00000375663 DHRS12A0PJE2 317 aa17■□□□□ 0.31
VARS-215ENST00000375663 CLCN5P51795 746 aa17■□□□□ 0.31
VARS-215ENST00000375663 CDH13P55290 713 aa17■□□□□ 0.31
VARS-215ENST00000375663 ZBTB46Q86UZ6 589 aa17■□□□□ 0.31
VARS-215ENST00000375663 PGAM4Q8N0Y7 254 aa17■□□□□ 0.31
VARS-215ENST00000375663 CLPBQ9H078 707 aa17■□□□□ 0.31
VARS-215ENST00000375663 VTA1Q9NP79 307 aa17■□□□□ 0.31
VARS-215ENST00000375663 ARHGEF9O43307 516 aa17■□□□□ 0.31
VARS-215ENST00000375663 BUD23O43709 281 aaKnown RBP17■□□□□ 0.31
VARS-215ENST00000375663 KATNA1O75449 491 aa17■□□□□ 0.31
VARS-215ENST00000375663 IRF1P10914 325 aa17■□□□□ 0.31
VARS-215ENST00000375663 ADRA1BP35368 520 aa17■□□□□ 0.31
VARS-215ENST00000375663 CCT8P50990 548 aa17■□□□□ 0.31
VARS-215ENST00000375663 TAF1CQ15572 869 aaPredicted RBP17■□□□□ 0.31
VARS-215ENST00000375663 ZIK1Q3SY52 487 aaPredicted RBP17■□□□□ 0.31
VARS-215ENST00000375663 ZNF483Q8TF39 744 aaPredicted RBP17■□□□□ 0.31
VARS-215ENST00000375663 PLGRKTQ9HBL7 147 aa17■□□□□ 0.31
VARS-215ENST00000375663 MYH13Q9UKX3 1938 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.99■□□□□ 0.31
VARS-215ENST00000375663 BTN3A1O00481 513 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 HOXB8P17481 243 aaPredicted RBP16.99■□□□□ 0.31
VARS-215ENST00000375663 ZNF177Q13360 481 aaPredicted RBP16.99■□□□□ 0.31
VARS-215ENST00000375663 MTX3Q5HYI7 312 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 SLC26A9Q7LBE3 791 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 SATL1Q86VE3 508 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 ATG16L2Q8NAA4 619 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 TRPC4APQ8TEL6 797 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 MCRS1Q96EZ8 462 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 DGCR6LQ9BY27 220 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 DPY30Q9C005 99 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 NOL11Q9H8H0 719 aaKnown RBP16.99■□□□□ 0.31
VARS-215ENST00000375663 TMEM161AQ9NX61 479 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 DNAJB4Q9UDY4 337 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 TMCO1Q9UM00 188 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 CXCL11O14625 94 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 ADCY6O43306 1168 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 NRP2O60462 931 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 MYH3P11055 1940 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 SLC11A2P49281 568 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 SIX1Q15475 284 aaPredicted RBP16.99■□□□□ 0.31
VARS-215ENST00000375663 FSTL4Q6MZW2 842 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 CCDC103Q8IW40 242 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 OR56A4Q8NGH8 313 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 FIZ1Q96SL8 496 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 ZNF541Q9H0D2 1346 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 RAB26Q9ULW5 256 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.99■□□□□ 0.31
VARS-215ENST00000375663 TIPRLO75663 272 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 WDR47O94967 919 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 POMCP01189 267 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 HGFP14210 728 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 AXLP30530 894 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 RALGDSQ12967 914 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 SNX17Q15036 470 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 CA9Q16790 459 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 CNPY1Q3B7I2 92 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 TTC23LQ6PF05 361 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 ABRAXAS1Q6UWZ7 409 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 GAD1Q99259 594 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 ARHGEF4Q9NR80 690 aa16.99■□□□□ 0.31
VARS-215ENST00000375663 RCOR3Q9P2K3 495 aaPredicted RBP16.99■□□□□ 0.31
VARS-215ENST00000375663 TK2O00142 265 aa16.98■□□□□ 0.31
VARS-215ENST00000375663 SPTLC1O15269 473 aa16.98■□□□□ 0.31
VARS-215ENST00000375663 HS6ST1O60243 411 aa16.98■□□□□ 0.31
VARS-215ENST00000375663 VPS4BO75351 444 aa16.98■□□□□ 0.31
VARS-215ENST00000375663 ENDOD1O94919 500 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms