RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 TBC1D3IA0A087WXS9 549 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 TBC1D3EA0A087X179 549 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 TBC1D3KA0A087X1G2 549 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 TBC1D3FA6NER0 549 aaPredicted RBP12.46□□□□□ -0.41
LSM2-208ENST00000375661 SOWAHDA6NJG2 315 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 C2CD4BA6NLJ0 364 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 TBC1D3LB9A6J9 549 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 ERVH48-1M5A8F1 160 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 LCA5LO95447 670 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 CYP1A2P05177 515 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 TBC1D3HP0C7X1 549 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 MYBL1P10243 752 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 KRT3P12035 628 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 MZF1P28698 734 aaPredicted RBP12.46□□□□□ -0.41
LSM2-208ENST00000375661 RFC1P35251 1148 aaPredicted RBP12.46□□□□□ -0.41
LSM2-208ENST00000375661 PSMD8P48556 350 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 VASPP50552 380 aaPredicted RBP12.46□□□□□ -0.41
LSM2-208ENST00000375661 RPL7AP62424 266 aaKnown RBP12.46□□□□□ -0.41
LSM2-208ENST00000375661 INSM1Q01101 510 aaPredicted RBP12.46□□□□□ -0.41
LSM2-208ENST00000375661 TLE3Q04726 772 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 SULT2A1Q06520 285 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 ZNF211Q13398 564 aaPredicted RBP12.46□□□□□ -0.41
LSM2-208ENST00000375661 PROX2Q3B8N5 592 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 CCDC14Q49A88 953 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 FSCBQ5H9T9 825 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 TBC1D3GQ6DHY5 549 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 TBC1D3CQ6IPX1 549 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 BNIPLQ7Z465 357 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 DSG4Q86SJ6 1040 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 TRIM69Q86WT6 500 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 SPATS2Q86XZ4 545 aaKnown RBP12.46□□□□□ -0.41
LSM2-208ENST00000375661 CCDC170Q8IYT3 715 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 TBC1D3Q8IZP1 549 aaPredicted RBP12.46□□□□□ -0.41
LSM2-208ENST00000375661 ZNF653Q96CK0 615 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 ARHGEF26Q96DR7 871 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 SLC39A13Q96H72 371 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 BAG1Q99933 345 aaPredicted RBP12.46□□□□□ -0.41
LSM2-208ENST00000375661 SELENOOQ9BVL4 669 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 THAP2Q9H0W7 228 aa12.46□□□□□ -0.41
LSM2-208ENST00000375661 TDRD6O60522 2096 aaKnown RBP12.46□□□□□ -0.42
LSM2-208ENST00000375661 ANKRD62A6NC57 917 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 GOLGA6L6A8MZA4 724 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 PLRG1O43660 514 aaKnown RBP12.45□□□□□ -0.42
LSM2-208ENST00000375661 RNGTTO60942 597 aaKnown RBP12.45□□□□□ -0.42
LSM2-208ENST00000375661 IL1BP01584 269 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 H2AFZP0C0S5 128 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 DRD3P35462 400 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 CTSOP43234 321 aaPredicted RBP12.45□□□□□ -0.42
LSM2-208ENST00000375661 PLK1P53350 603 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 UCNP55089 124 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 OXCT1P55809 520 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 GSDMDP57764 484 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 PPP2CBP62714 309 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 PPP2CAP67775 309 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 RHDQ02161 417 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 OGDHQ02218 1023 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 CFHR1Q03591 330 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 SLC25A52Q3SY17 297 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 RAB6CQ53S08 254 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 FAM46CQ5VWP2 391 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 H2AFVQ71UI9 128 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 SPACA3Q8IXA5 215 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 LSMEM2Q8N112 164 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 STK40Q8N2I9 435 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 ZNF248Q8NDW4 579 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 TRIM11Q96F44 468 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 PDLIM2Q96JY6 352 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 CFAP57Q96MR6 1250 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 ZNF578Q96N58 590 aaPredicted RBP12.45□□□□□ -0.42
LSM2-208ENST00000375661 MCEEQ96PE7 176 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 PPP1R9BQ96SB3 815 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 TBCBQ99426 244 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 TRIM7Q9C029 511 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 RAB6CQ9H0N0 254 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 PARVAQ9NVD7 372 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 RRN3Q9NYV6 651 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 MYO1AQ9UBC5 1043 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 SLCO3A1Q9UIG8 710 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 STAP1Q9ULZ2 295 aa12.45□□□□□ -0.42
LSM2-208ENST00000375661 EPN1Q9Y6I3 576 aaPredicted RBP12.45□□□□□ -0.42
LSM2-208ENST00000375661 SETXQ7Z333 2677 aaKnown RBP12.45□□□□□ -0.42
LSM2-208ENST00000375661 ASH1LQ9NR48 2969 aaKnown RBP12.45□□□□□ -0.42
LSM2-208ENST00000375661 SYNJ2BP-COX16A0A087WUM0 186 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 TMEM191CA6NGB0 347 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 EIF3CLB5ME19 914 aaKnown RBP12.44□□□□□ -0.42
LSM2-208ENST00000375661 PRAMEF26H0Y7S4 382 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 M0QYT0 321 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 ALOX15BO15296 676 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 ENDOD1O94919 500 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 MT-CO3P00414 261 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 APOEP02649 317 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 PDGFRAP16234 1089 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 GPD1P21695 349 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 CYLC1P35663 651 aaPredicted RBP12.44□□□□□ -0.42
LSM2-208ENST00000375661 MAGEA1P43355 309 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 PTPN9P43378 593 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 SULT1E1P49888 294 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 PCBP4P57723 403 aaKnown RBP12.44□□□□□ -0.42
LSM2-208ENST00000375661 STAT4Q14765 748 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 C15orf59Q2T9L4 293 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms