RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 NPY2RP49146 381 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 HARS2P49590 506 aaKnown RBP17.3■□□□□ 0.36
RXRB-201ENST00000374680 PTPRCAPQ14761 206 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 TRMT5Q32P41 509 aaKnown RBP17.3■□□□□ 0.36
RXRB-201ENST00000374680 LSM12Q3MHD2 195 aaKnown RBP17.3■□□□□ 0.36
RXRB-201ENST00000374680 RBM20Q5T481 1227 aaKnown RBP17.3■□□□□ 0.36
RXRB-201ENST00000374680 RNF111Q6ZNA4 994 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 PTAR1Q7Z6K3 402 aaPredicted RBP17.3■□□□□ 0.36
RXRB-201ENST00000374680 ZNF280BQ86YH2 543 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 ARHGAP12Q8IWW6 846 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 PHF21BQ96EK2 531 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 GABRQQ9UN88 632 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 AK5Q9Y6K8 562 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 OR51F1A6NGY5 319 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 TIMM44O43615 452 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 SBK3P0C264 359 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 SLC35E2BP0CK96 405 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 TFEBP19484 476 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 RGS2P41220 211 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 PAPOLAP51003 745 aaKnown RBP17.3■□□□□ 0.36
RXRB-201ENST00000374680 TAS2R39P59534 338 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 SCAPQ12770 1279 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 DLG1Q12959 904 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 INSCQ1MX18 579 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 ANO4Q32M45 955 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 DCLRE1AQ6PJP8 1040 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 FAM156AQ8NDB6 213 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 PHC3Q8NDX5 983 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 OSER1Q9NX31 292 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 GTSE1Q9NYZ3 720 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 CDH22Q9UJ99 828 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 CDY1Q9Y6F8 540 aa17.3■□□□□ 0.36
RXRB-201ENST00000374680 FAM95CA0A1B0GW59 222 aa17.29■□□□□ 0.36
RXRB-201ENST00000374680 J3KR12 359 aa17.29■□□□□ 0.36
RXRB-201ENST00000374680 AKR1A1P14550 325 aa17.29■□□□□ 0.36
RXRB-201ENST00000374680 ACADSP16219 412 aa17.29■□□□□ 0.36
RXRB-201ENST00000374680 SLC1A2P43004 574 aa17.29■□□□□ 0.36
RXRB-201ENST00000374680 CBLBQ13191 982 aa17.29■□□□□ 0.36
RXRB-201ENST00000374680 RYBPQ8N488 228 aaPredicted RBP17.29■□□□□ 0.36
RXRB-201ENST00000374680 TTC9BQ8N6N2 239 aa17.29■□□□□ 0.36
RXRB-201ENST00000374680 OR6P1Q8NGX9 317 aa17.29■□□□□ 0.36
RXRB-201ENST00000374680 ZIC5Q96T25 663 aa17.29■□□□□ 0.36
RXRB-201ENST00000374680 ZNF184Q99676 751 aaPredicted RBP17.29■□□□□ 0.36
RXRB-201ENST00000374680 PIDD1Q9HB75 910 aa17.29■□□□□ 0.36
RXRB-201ENST00000374680 GLOD4Q9HC38 313 aa17.29■□□□□ 0.36
RXRB-201ENST00000374680 ANGPTL2Q9UKU9 493 aa17.29■□□□□ 0.36
RXRB-201ENST00000374680 DLX3O60479 287 aa17.29■□□□□ 0.36
RXRB-201ENST00000374680 EPGNQ6UW88 154 aa17.29■□□□□ 0.36
RXRB-201ENST00000374680 SDCCAG8Q86SQ7 713 aaPredicted RBP17.29■□□□□ 0.36
RXRB-201ENST00000374680 MYLK4Q86YV6 388 aaPredicted RBP17.29■□□□□ 0.36
RXRB-201ENST00000374680 CENPLQ8N0S6 344 aaPredicted RBP17.29■□□□□ 0.36
RXRB-201ENST00000374680 CMTM5Q96DZ9 223 aa17.29■□□□□ 0.36
RXRB-201ENST00000374680 OXSMQ9NWU1 459 aa17.29■□□□□ 0.36
RXRB-201ENST00000374680 RPL26L1Q9UNX3 145 aaKnown RBP17.29■□□□□ 0.36
RXRB-201ENST00000374680 ACOT9Q9Y305 439 aa17.29■□□□□ 0.36
RXRB-201ENST00000374680 PTCH2Q9Y6C5 1203 aa17.29■□□□□ 0.36
RXRB-201ENST00000374680 MAFKO60675 156 aa17.28■□□□□ 0.36
RXRB-201ENST00000374680 CNTN5O94779 1100 aa17.28■□□□□ 0.36
RXRB-201ENST00000374680 SLC4A1P02730 911 aa17.28■□□□□ 0.36
RXRB-201ENST00000374680 MPOP05164 745 aa17.28■□□□□ 0.36
RXRB-201ENST00000374680 CCNHP51946 323 aaPredicted RBP17.28■□□□□ 0.36
RXRB-201ENST00000374680 PM20D1Q6GTS8 502 aa17.28■□□□□ 0.36
RXRB-201ENST00000374680 PKN3Q6P5Z2 889 aa17.28■□□□□ 0.36
RXRB-201ENST00000374680 MTG1Q9BT17 334 aaPredicted RBP17.28■□□□□ 0.36
RXRB-201ENST00000374680 POMPQ9Y244 141 aa17.28■□□□□ 0.36
RXRB-201ENST00000374680 FNDC3AQ9Y2H6 1198 aaKnown RBP17.28■□□□□ 0.36
RXRB-201ENST00000374680 KCTD3Q9Y597 815 aa17.28■□□□□ 0.36
RXRB-201ENST00000374680 HDCP19113 662 aa17.28■□□□□ 0.36
RXRB-201ENST00000374680 SLC12A2P55011 1212 aa17.28■□□□□ 0.36
RXRB-201ENST00000374680 EFEMP1Q12805 493 aa17.28■□□□□ 0.36
RXRB-201ENST00000374680 CCNIQ14094 377 aa17.28■□□□□ 0.36
RXRB-201ENST00000374680 SCD5Q86SK9 330 aa17.28■□□□□ 0.36
RXRB-201ENST00000374680 ATAD1Q8NBU5 361 aa17.28■□□□□ 0.36
RXRB-201ENST00000374680 SENP6Q9GZR1 1112 aaPredicted RBP17.28■□□□□ 0.36
RXRB-201ENST00000374680 ZNF212Q9UDV6 495 aa17.28■□□□□ 0.36
RXRB-201ENST00000374680 IPO11Q9UI26 975 aaKnown RBP17.28■□□□□ 0.36
RXRB-201ENST00000374680 ADAMTS6Q9UKP5 1117 aa17.28■□□□□ 0.36
RXRB-201ENST00000374680 SLC27A5Q9Y2P5 690 aa17.28■□□□□ 0.36
RXRB-201ENST00000374680 IRAK2O43187 625 aa17.27■□□□□ 0.36
RXRB-201ENST00000374680 ASGR1P07306 291 aa17.27■□□□□ 0.36
RXRB-201ENST00000374680 ARNTP27540 789 aa17.27■□□□□ 0.36
RXRB-201ENST00000374680 CCR1P32246 355 aa17.27■□□□□ 0.36
RXRB-201ENST00000374680 OR1G1P47890 313 aa17.27■□□□□ 0.36
RXRB-201ENST00000374680 TSPY1Q01534 308 aa17.27■□□□□ 0.36
RXRB-201ENST00000374680 FBXO48Q5FWF7 155 aa17.27■□□□□ 0.36
RXRB-201ENST00000374680 STXBP5Q5T5C0 1151 aa17.27■□□□□ 0.36
RXRB-201ENST00000374680 FAM91A1Q658Y4 838 aa17.27■□□□□ 0.36
RXRB-201ENST00000374680 SEL1L3Q68CR1 1132 aa17.27■□□□□ 0.36
RXRB-201ENST00000374680 SMYD5Q6GMV2 418 aa17.27■□□□□ 0.36
RXRB-201ENST00000374680 SH3RF2Q8TEC5 729 aa17.27■□□□□ 0.36
RXRB-201ENST00000374680 SREK1Q8WXA9 508 aaKnown RBP17.27■□□□□ 0.36
RXRB-201ENST00000374680 RSPH1Q8WYR4 309 aa17.27■□□□□ 0.36
RXRB-201ENST00000374680 TMA16Q96EY4 203 aaKnown RBP17.27■□□□□ 0.36
RXRB-201ENST00000374680 CDRT15Q96T59 188 aa17.27■□□□□ 0.36
RXRB-201ENST00000374680 EBF3Q9H4W6 596 aa17.27■□□□□ 0.36
RXRB-201ENST00000374680 DNAJC28Q9NX36 388 aa17.27■□□□□ 0.36
RXRB-201ENST00000374680 DONSONQ9NYP3 566 aa17.27■□□□□ 0.36
RXRB-201ENST00000374680 LRCH1Q9Y2L9 728 aa17.27■□□□□ 0.36
RXRB-201ENST00000374680 SF3B1O75533 1304 aaKnown RBP eCLIP17.27■□□□□ 0.367e-6■■■■■ 28.7
RXRB-201ENST00000374680 GPR182O15218 404 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms