RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 FDFT1P37268 417 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 ALDH7A1P49419 539 aaKnown RBP10.97□□□□□ -0.65
CXCL12-203ENST00000374429 PKNOX1P55347 436 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 FKBP1BP68106 108 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 ADAM17P78536 824 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 KHDC1Q4VXA5 237 aaKnown RBP10.97□□□□□ -0.65
CXCL12-203ENST00000374429 CLLU1OSQ5K130 101 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 CNSTQ6PJW8 725 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 PIM3Q86V86 326 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 ARNTL2Q8WYA1 636 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 UXTQ9UBK9 157 aaPredicted RBP10.97□□□□□ -0.65
CXCL12-203ENST00000374429 STARD13Q9Y3M8 1113 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 PCDHGC4Q9Y5F7 938 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 MGAMO43451 1857 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 ZNF646O15015 1829 aaPredicted RBP10.96□□□□□ -0.65
CXCL12-203ENST00000374429 TET1Q8NFU7 2136 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 MYO15AQ9UKN7 3530 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 TLR5O60602 858 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 ACRP10323 421 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 CYBAP13498 195 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 PGAM1P18669 254 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 ROR2Q01974 943 aaKnown RBP10.96□□□□□ -0.65
CXCL12-203ENST00000374429 ENPEPQ07075 957 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 PLD1Q13393 1074 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 DEFB115Q30KQ5 88 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 EMC10Q5UCC4 262 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 WDR60Q8WVS4 1066 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 HDAC10Q969S8 669 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 NSL1Q96IY1 281 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 SEMA3CQ99985 751 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 MUC3BQ9H195 1237 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 CRISPLD1Q9H336 500 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 TLR9Q9NR96 1032 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 GIT1Q9Y2X7 761 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 DERAQ9Y315 318 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 HS3ST4Q9Y661 456 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 LCTP09848 1927 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 TRIOO75962 3097 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 HAS3O00219 553 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 PRRG1O14668 218 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 TM9SF1O15321 606 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 GP5P40197 560 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 WNT3AP56704 352 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 ASPHQ12797 758 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 RBM20Q5T481 1227 aaKnown RBP10.96□□□□□ -0.65
CXCL12-203ENST00000374429 MARC1Q5VT66 337 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 RNF19BQ6ZMZ0 732 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 RGS9BPQ6ZS82 235 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 CACUL1Q86Y37 369 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 GBP7Q8N8V2 638 aaPredicted RBP10.96□□□□□ -0.65
CXCL12-203ENST00000374429 MAB21L3Q8N8X9 362 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 STK32AQ8WU08 396 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 ALKBH8Q96BT7 664 aaKnown RBP10.96□□□□□ -0.65
CXCL12-203ENST00000374429 DDX50Q9BQ39 737 aaKnown RBP10.96□□□□□ -0.65
CXCL12-203ENST00000374429 GIMAP2Q9UG22 337 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 SLC12A4Q9UP95 1085 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 V9GYQ6 96 aa10.96□□□□□ -0.65
CXCL12-203ENST00000374429 F5P12259 2224 aa10.96□□□□□ -0.66
CXCL12-203ENST00000374429 YWHAQP27348 245 aa10.96□□□□□ -0.66
CXCL12-203ENST00000374429 GKP32189 559 aa10.96□□□□□ -0.66
CXCL12-203ENST00000374429 MBTPS1Q14703 1052 aa10.96□□□□□ -0.66
CXCL12-203ENST00000374429 TNFAIP8L3Q5GJ75 292 aa10.96□□□□□ -0.66
CXCL12-203ENST00000374429 ITPRIPL1Q6GPH6 555 aa10.96□□□□□ -0.66
CXCL12-203ENST00000374429 YTHDF3Q7Z739 585 aaKnown RBP10.96□□□□□ -0.66
CXCL12-203ENST00000374429 UTP4Q969X6 686 aaKnown RBP10.96□□□□□ -0.66
CXCL12-203ENST00000374429 MYEOVQ96EZ4 313 aa10.96□□□□□ -0.66
CXCL12-203ENST00000374429 RAB3IPQ96QF0 476 aaPredicted RBP10.96□□□□□ -0.66
CXCL12-203ENST00000374429 SMG9Q9H0W8 520 aaKnown RBP10.96□□□□□ -0.66
CXCL12-203ENST00000374429 ARHGEF38Q9NXL2 777 aa10.96□□□□□ -0.66
CXCL12-203ENST00000374429 KANSL3Q9P2N6 904 aa10.96□□□□□ -0.66
CXCL12-203ENST00000374429 AFF4Q9UHB7 1163 aaKnown RBP10.96□□□□□ -0.66
CXCL12-203ENST00000374429 T-ENOLP0DO92 83 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 POLD3Q15054 466 aaPredicted RBP10.95□□□□□ -0.66
CXCL12-203ENST00000374429 RTP2Q5QGT7 225 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 TLDC1Q6P9B6 456 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 TAS2R42Q7RTR8 314 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 TEX9Q8N6V9 391 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 PHC3Q8NDX5 983 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 IGSF8Q969P0 613 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 GRAMD1AQ96CP6 724 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 HDAC11Q96DB2 347 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 XPR1Q9UBH6 696 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 CIDEBQ9UHD4 219 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 ARL5AQ9Y689 179 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 WASF2Q9Y6W5 498 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 BPTFQ12830 3046 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 BRCA1P38398 1863 aaKnown RBP10.95□□□□□ -0.66
CXCL12-203ENST00000374429 E7ESA3 106 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 SPECC1L-ADORA2AF8WAN1 911 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 DPYSL4O14531 572 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 SUPT7LO94864 414 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 PIGNO95427 931 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 AHSGP02765 367 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 FESP07332 822 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 BPGMP07738 259 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 CCDC15Q0P6D6 951 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 XRCC4Q13426 336 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 SEMA5AQ13591 1074 aa10.95□□□□□ -0.66
CXCL12-203ENST00000374429 TSTA3Q13630 321 aaPredicted RBP10.95□□□□□ -0.66
CXCL12-203ENST00000374429 PPM1LQ5SGD2 360 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms