RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 SLC35G2Q8TBE7 412 aa21.64■■□□□ 1.05
TMEM54-202ENST00000373463 CSPG4P5Q96PW8 444 aa21.64■■□□□ 1.05
TMEM54-202ENST00000373463 SLC6A14Q9UN76 642 aa21.64■■□□□ 1.05
TMEM54-202ENST00000373463 FAM47DPA6NHR8 397 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 TM4SF5O14894 197 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 BUB1O43683 1085 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 LEFTY1O75610 366 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 MTA2O94776 668 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 FSBPO95073 299 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 ENGP17813 658 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 PAPOLAP51003 745 aaKnown RBP21.63■■□□□ 1.05
TMEM54-202ENST00000373463 ZNF135P52742 658 aaPredicted RBP21.63■■□□□ 1.05
TMEM54-202ENST00000373463 PPP2CBP62714 309 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 PPP2CAP67775 309 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 BNC1Q01954 994 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 ATXN7L2Q5T6C5 722 aaPredicted RBP21.63■■□□□ 1.05
TMEM54-202ENST00000373463 FAM46CQ5VWP2 391 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 ARHGAP36Q6ZRI8 547 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 PLPP6Q8IY26 295 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 OR6K2Q8NGY2 324 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 OR14C36Q8NHC7 312 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 CCDC114Q96M63 670 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 MIR1-1HGQ9H1L0 117 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 LHX3Q9UBR4 397 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 IL36AQ9UHA7 158 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 CDV3Q9UKY7 258 aaKnown RBP21.63■■□□□ 1.05
TMEM54-202ENST00000373463 HPCAL4Q9UM19 191 aa21.63■■□□□ 1.05
TMEM54-202ENST00000373463 ZSCAN5CA6NGD5 496 aaPredicted RBP21.62■■□□□ 1.05
TMEM54-202ENST00000373463 C1QTNF3-AMACRE9PGA6 284 aa21.62■■□□□ 1.05
TMEM54-202ENST00000373463 H3BRJ5 948 aa21.62■■□□□ 1.05
TMEM54-202ENST00000373463 KPNA3O00505 521 aaPredicted RBP21.62■■□□□ 1.05
TMEM54-202ENST00000373463 DAPK3O43293 454 aa21.62■■□□□ 1.05
TMEM54-202ENST00000373463 PLRG1O43660 514 aaKnown RBP21.62■■□□□ 1.05
TMEM54-202ENST00000373463 PRAMEF11O60813 436 aa21.62■■□□□ 1.05
TMEM54-202ENST00000373463 LCA5LO95447 670 aa21.62■■□□□ 1.05
TMEM54-202ENST00000373463 DNA2P51530 1060 aa21.62■■□□□ 1.05
TMEM54-202ENST00000373463 GEMIN4P57678 1058 aaKnown RBP21.62■■□□□ 1.05
TMEM54-202ENST00000373463 MMRN1Q13201 1228 aa21.62■■□□□ 1.05
TMEM54-202ENST00000373463 CYTH1Q15438 398 aa21.62■■□□□ 1.05
TMEM54-202ENST00000373463 ZNF354CQ86Y25 554 aa21.62■■□□□ 1.05
TMEM54-202ENST00000373463 OR2AP1Q8NGE2 309 aa21.62■■□□□ 1.05
TMEM54-202ENST00000373463 OR2I1PQ8NGU4 316 aa21.62■■□□□ 1.05
TMEM54-202ENST00000373463 CEP76Q8TAP6 659 aa21.62■■□□□ 1.05
TMEM54-202ENST00000373463 SNX19Q92543 992 aa21.62■■□□□ 1.05
TMEM54-202ENST00000373463 HEPHQ9BQS7 1158 aa21.62■■□□□ 1.05
TMEM54-202ENST00000373463 TFR2Q9UP52 801 aa21.62■■□□□ 1.05
TMEM54-202ENST00000373463 A0A1B0GTW7 788 aa21.61■■□□□ 1.05
TMEM54-202ENST00000373463 TMEM110-MUSTN1A8MSY1 372 aa21.61■■□□□ 1.05
TMEM54-202ENST00000373463 GSRP00390 522 aa21.61■■□□□ 1.05
TMEM54-202ENST00000373463 PRNPP04156 253 aa21.61■■□□□ 1.05
TMEM54-202ENST00000373463 MAN1A1P33908 653 aa21.61■■□□□ 1.05
TMEM54-202ENST00000373463 RECQLP46063 649 aaPredicted RBP21.61■■□□□ 1.05
TMEM54-202ENST00000373463 SFSWAPQ12872 951 aaKnown RBP21.61■■□□□ 1.05
TMEM54-202ENST00000373463 PUM1Q14671 1186 aaKnown RBP eCLIP21.61■■□□□ 1.05
TMEM54-202ENST00000373463 TCEAL1Q15170 157 aa21.61■■□□□ 1.05
TMEM54-202ENST00000373463 INO80DQ53TQ3 878 aaPredicted RBP21.61■■□□□ 1.05
TMEM54-202ENST00000373463 RFFLQ8WZ73 363 aa21.61■■□□□ 1.05
TMEM54-202ENST00000373463 PANX2Q96RD6 677 aa21.61■■□□□ 1.05
TMEM54-202ENST00000373463 NUSAP1Q9BXS6 441 aaKnown RBP21.61■■□□□ 1.05
TMEM54-202ENST00000373463 KLHL11Q9NVR0 708 aa21.61■■□□□ 1.05
TMEM54-202ENST00000373463 SUSD2Q9UGT4 822 aa21.61■■□□□ 1.05
TMEM54-202ENST00000373463 FARP1Q9Y4F1 1045 aaPredicted RBP21.61■■□□□ 1.05
TMEM54-202ENST00000373463 LRRC72A6NJI9 287 aa21.6■■□□□ 1.05
TMEM54-202ENST00000373463 C4orf47A7E2U8 309 aa21.6■■□□□ 1.05
TMEM54-202ENST00000373463 WNT9AO14904 365 aa21.6■■□□□ 1.05
TMEM54-202ENST00000373463 BCAT2O15382 392 aaPredicted RBP21.6■■□□□ 1.05
TMEM54-202ENST00000373463 SLC7A4O43246 635 aa21.6■■□□□ 1.05
TMEM54-202ENST00000373463 CD27P26842 260 aa21.6■■□□□ 1.05
TMEM54-202ENST00000373463 GJC1P36383 396 aa21.6■■□□□ 1.05
TMEM54-202ENST00000373463 ARL4AP40617 200 aa21.6■■□□□ 1.05
TMEM54-202ENST00000373463 SSR1P43307 286 aaKnown RBP21.6■■□□□ 1.05
TMEM54-202ENST00000373463 CDH6P55285 790 aa21.6■■□□□ 1.05
TMEM54-202ENST00000373463 DPYSL3Q14195 570 aa21.6■■□□□ 1.05
TMEM54-202ENST00000373463 MESDQ14696 234 aa21.6■■□□□ 1.05
TMEM54-202ENST00000373463 ZDHHC6Q9H6R6 413 aa21.6■■□□□ 1.05
TMEM54-202ENST00000373463 TM9SF3Q9HD45 589 aa21.6■■□□□ 1.05
TMEM54-202ENST00000373463 DONSONQ9NYP3 566 aa21.6■■□□□ 1.05
TMEM54-202ENST00000373463 INTUQ9ULD6 942 aa21.6■■□□□ 1.05
TMEM54-202ENST00000373463 TP53BP1Q12888 1972 aaPredicted RBP21.59■■□□□ 1.05
TMEM54-202ENST00000373463 DCDC2BA2VCK2 349 aa21.59■■□□□ 1.05
TMEM54-202ENST00000373463 ARHGAP42A6NI28 874 aa21.59■■□□□ 1.05
TMEM54-202ENST00000373463 SOWAHDA6NJG2 315 aa21.59■■□□□ 1.05
TMEM54-202ENST00000373463 ARHGAP33O14559 1287 aa21.59■■□□□ 1.05
TMEM54-202ENST00000373463 LATO43561 262 aa21.59■■□□□ 1.05
TMEM54-202ENST00000373463 RGRP47804 291 aa21.59■■□□□ 1.05
TMEM54-202ENST00000373463 CCR5P51681 352 aa21.59■■□□□ 1.05
TMEM54-202ENST00000373463 HADHQ16836 314 aaKnown RBP21.59■■□□□ 1.05
TMEM54-202ENST00000373463 MYLK3Q32MK0 819 aa21.59■■□□□ 1.05
TMEM54-202ENST00000373463 LAYNQ6UX15 382 aa21.59■■□□□ 1.05
TMEM54-202ENST00000373463 RABEPKQ7Z6M1 372 aa21.59■■□□□ 1.05
TMEM54-202ENST00000373463 RHOT2Q8IXI1 618 aa21.59■■□□□ 1.05
TMEM54-202ENST00000373463 CASKIN2Q8WXE0 1202 aa21.59■■□□□ 1.05
TMEM54-202ENST00000373463 RTKNQ9BST9 563 aa21.59■■□□□ 1.05
TMEM54-202ENST00000373463 HDAC8Q9BY41 377 aa21.59■■□□□ 1.05
TMEM54-202ENST00000373463 TMEM9BQ9NQ34 198 aa21.59■■□□□ 1.05
TMEM54-202ENST00000373463 UBA2Q9UBT2 640 aaPredicted RBP21.59■■□□□ 1.05
TMEM54-202ENST00000373463 ASCC3Q8N3C0 2202 aaKnown RBP21.59■■□□□ 1.05
TMEM54-202ENST00000373463 TMEM131Q92545 1883 aa21.58■■□□□ 1.05
TMEM54-202ENST00000373463 TBC1D3DA0A087WVF3 549 aa21.58■■□□□ 1.05
TMEM54-202ENST00000373463 TBC1D3IA0A087WXS9 549 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms