RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 HEPHQ9BQS7 1158 aa20.39■□□□□ 0.85
TMEM53-205ENST00000372244 EBF2Q9HAK2 575 aa20.39■□□□□ 0.85
TMEM53-205ENST00000372244 FSCN3Q9NQT6 498 aa20.39■□□□□ 0.85
TMEM53-205ENST00000372244 IL36AQ9UHA7 158 aa20.39■□□□□ 0.85
TMEM53-205ENST00000372244 ASCC3Q8N3C0 2202 aaKnown RBP20.38■□□□□ 0.85
TMEM53-205ENST00000372244 FAM47DPA6NHR8 397 aa20.38■□□□□ 0.85
TMEM53-205ENST00000372244 PLRG1O43660 514 aaKnown RBP20.38■□□□□ 0.85
TMEM53-205ENST00000372244 BUB1O43683 1085 aa20.38■□□□□ 0.85
TMEM53-205ENST00000372244 LEFTY1O75610 366 aa20.38■□□□□ 0.85
TMEM53-205ENST00000372244 SYPP08247 313 aa20.38■□□□□ 0.85
TMEM53-205ENST00000372244 ZNF75DP51815 510 aa20.38■□□□□ 0.85
TMEM53-205ENST00000372244 POM121L1PQ3SYA9 428 aa20.38■□□□□ 0.85
TMEM53-205ENST00000372244 LEKR1Q6ZMV7 388 aa20.38■□□□□ 0.85
TMEM53-205ENST00000372244 MRFAP1L1Q96HT8 127 aa20.38■□□□□ 0.85
TMEM53-205ENST00000372244 HDAC8Q9BY41 377 aa20.38■□□□□ 0.85
TMEM53-205ENST00000372244 SLC39A8Q9C0K1 460 aa20.38■□□□□ 0.85
TMEM53-205ENST00000372244 ZWILCHQ9H900 591 aa20.38■□□□□ 0.85
TMEM53-205ENST00000372244 CTTNBP2NLQ9P2B4 639 aa20.38■□□□□ 0.85
TMEM53-205ENST00000372244 TPX2Q9ULW0 747 aaKnown RBP20.38■□□□□ 0.85
TMEM53-205ENST00000372244 TBC1D3DA0A087WVF3 549 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 TBC1D3IA0A087WXS9 549 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 TBC1D3EA0A087X179 549 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 TBC1D3KA0A087X1G2 549 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 A0A1W2PPC4 97 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 TBC1D3FA6NER0 549 aaPredicted RBP20.37■□□□□ 0.85
TMEM53-205ENST00000372244 TBC1D3LB9A6J9 549 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 DAPK3O43293 454 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 LATO43561 262 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 PROSCO94903 275 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 GSRP00390 522 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 TBC1D3HP0C7X1 549 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 DNA2P51530 1060 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 CCNHP51946 323 aaPredicted RBP20.37■□□□□ 0.85
TMEM53-205ENST00000372244 TAS2R38P59533 333 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 SMTNL2Q2TAL5 461 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 PIP5KL1Q5T9C9 394 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 TBC1D3GQ6DHY5 549 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 TBC1D3CQ6IPX1 549 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 ARHGAP12Q8IWW6 846 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 TBC1D3Q8IZP1 549 aaPredicted RBP20.37■□□□□ 0.85
TMEM53-205ENST00000372244 OR2AP1Q8NGE2 309 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 FAM71BQ8TC56 605 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 SNX19Q92543 992 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 ARRDC3Q96B67 414 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 ZDHHC5Q9C0B5 715 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 SPTLC3Q9NUV7 552 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 KPNA3O00505 521 aaPredicted RBP20.37■□□□□ 0.85
TMEM53-205ENST00000372244 POP4O95707 220 aaKnown RBP20.37■□□□□ 0.85
TMEM53-205ENST00000372244 IL4RP24394 825 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 AFF3P51826 1226 aaKnown RBP20.37■□□□□ 0.85
TMEM53-205ENST00000372244 BNC1Q01954 994 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 CCDC15Q0P6D6 951 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 MYLK3Q32MK0 819 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 NPWQ8N729 165 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 SLC35G2Q8TBE7 412 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 GRIN3AQ8TCU5 1115 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 TSC1Q92574 1164 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 CELF6Q96J87 481 aaKnown RBP20.37■□□□□ 0.85
TMEM53-205ENST00000372244 LRIG1Q96JA1 1093 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 TM6SF2Q9BZW4 377 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 PDFQ9HBH1 243 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 TM9SF3Q9HD45 589 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.37■□□□□ 0.85
TMEM53-205ENST00000372244 LCMT1Q9UIC8 334 aa20.37■□□□□ 0.85
TMEM53-205ENST00000372244 PCDH15Q96QU1 1955 aa20.36■□□□□ 0.85
TMEM53-205ENST00000372244 NCOR2Q9Y618 2525 aa20.36■□□□□ 0.85
TMEM53-205ENST00000372244 PRAMEF11O60813 436 aa20.36■□□□□ 0.85
TMEM53-205ENST00000372244 TMCC1O94876 653 aa20.36■□□□□ 0.85
TMEM53-205ENST00000372244 MAPK8P45983 427 aa20.36■□□□□ 0.85
TMEM53-205ENST00000372244 CSNK1EP49674 416 aaKnown RBP20.36■□□□□ 0.85
TMEM53-205ENST00000372244 PAPOLAP51003 745 aaKnown RBP20.36■□□□□ 0.85
TMEM53-205ENST00000372244 ARSEP51690 589 aa20.36■□□□□ 0.85
TMEM53-205ENST00000372244 SNRPD1P62314 119 aaKnown RBP20.36■□□□□ 0.85
TMEM53-205ENST00000372244 CYTH1Q15438 398 aa20.36■□□□□ 0.85
TMEM53-205ENST00000372244 ERN2Q76MJ5 926 aaKnown RBP20.36■□□□□ 0.85
TMEM53-205ENST00000372244 ZNF354CQ86Y25 554 aa20.36■□□□□ 0.85
TMEM53-205ENST00000372244 LZTR1Q8N653 840 aa20.36■□□□□ 0.85
TMEM53-205ENST00000372244 HSPH1Q92598 858 aa20.36■□□□□ 0.85
TMEM53-205ENST00000372244 CSPG4P5Q96PW8 444 aa20.36■□□□□ 0.85
TMEM53-205ENST00000372244 DNAAF2Q9NVR5 837 aaKnown RBP20.36■□□□□ 0.85
TMEM53-205ENST00000372244 INTUQ9ULD6 942 aa20.36■□□□□ 0.85
TMEM53-205ENST00000372244 MFHAS1Q9Y4C4 1052 aa20.36■□□□□ 0.85
TMEM53-205ENST00000372244 CABIN1Q9Y6J0 2220 aa20.35■□□□□ 0.85
TMEM53-205ENST00000372244 ARHGAP42A6NI28 874 aa20.35■□□□□ 0.85
TMEM53-205ENST00000372244 H3BRJ5 948 aa20.35■□□□□ 0.85
TMEM53-205ENST00000372244 J3KR12 359 aa20.35■□□□□ 0.85
TMEM53-205ENST00000372244 GJB3O75712 270 aa20.35■□□□□ 0.85
TMEM53-205ENST00000372244 ITGB7P26010 798 aa20.35■□□□□ 0.85
TMEM53-205ENST00000372244 ARL4AP40617 200 aa20.35■□□□□ 0.85
TMEM53-205ENST00000372244 RACK1P63244 317 aaKnown RBP20.35■□□□□ 0.85
TMEM53-205ENST00000372244 GRIK2Q13002 908 aa20.35■□□□□ 0.85
TMEM53-205ENST00000372244 TCEAL1Q15170 157 aa20.35■□□□□ 0.85
TMEM53-205ENST00000372244 HADHQ16836 314 aaKnown RBP20.35■□□□□ 0.85
TMEM53-205ENST00000372244 NEK5Q6P3R8 708 aa20.35■□□□□ 0.85
TMEM53-205ENST00000372244 TRIM69Q86WT6 500 aa20.35■□□□□ 0.85
TMEM53-205ENST00000372244 CPNE8Q86YQ8 564 aa20.35■□□□□ 0.85
TMEM53-205ENST00000372244 GTPBP2Q9BX10 602 aaKnown RBP20.35■□□□□ 0.85
TMEM53-205ENST00000372244 PCDH18Q9HCL0 1135 aa20.35■□□□□ 0.85
TMEM53-205ENST00000372244 PREBQ9HCU5 417 aa20.35■□□□□ 0.85
TMEM53-205ENST00000372244 UPK3BL1B0FP48 263 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms