RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 AFDNP55196 1824 aaKnown RBP13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 TREHO43280 583 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 THEGLP0DJG4 465 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 GLUD2P49448 558 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 MGAT5Q09328 741 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 CRHR2Q13324 411 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 DDX39BQ13838 428 aaKnown RBP13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 POU6F1Q14863 301 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 IL17AQ16552 155 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 ARMC12Q5T9G4 340 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 OTOAQ7RTW8 1153 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 FAM136AQ96C01 138 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 UBDO15205 165 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 PEX10O60683 326 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 MMP13P45452 471 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 GLRBP48167 497 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 RAD23AP54725 363 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 CYP51A1Q16850 503 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 ARHGAP17Q68EM7 881 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 GLT6D1Q7Z4J2 308 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 ZNF554Q86TJ5 538 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 SLC22A9Q8IVM8 553 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 ZNF75CPQ92670 426 aaPredicted RBP13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 DNAJC19Q96DA6 116 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 ERLEC1Q96DZ1 483 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 TSEN34Q9BSV6 310 aaKnown RBP13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 C2orf49Q9BVC5 232 aaPredicted RBP13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 GUCA1CO95843 209 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 SERPINA4P29622 427 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 MAPK9P45984 424 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 TUSC3Q13454 348 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 RAP1GAP2Q684P5 730 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 CRELD2Q6UXH1 353 aaPredicted RBP13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 DENND1CQ8IV53 801 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 CCDC3Q9BQI4 270 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 WDR37Q9Y2I8 494 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 ACOT9Q9Y305 439 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 DYRK3O43781 588 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 PRIM2P49643 509 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 ATP1A4Q13733 1029 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 ATP6AP1LQ52LC2 224 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 ZNF438Q7Z4V0 828 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 LRRC52Q8N7C0 313 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 ANKRD52Q8NB46 1076 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 OSCP1Q8WVF1 389 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 RIOK2Q9BVS4 552 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 COMMD8Q9NX08 183 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 EHD3Q9NZN3 535 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 PCDHA3Q9Y5H8 950 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 PCDHA2Q9Y5H9 948 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 RAD54BQ9Y620 910 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 PTCH2Q9Y6C5 1203 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 PSMG1O95456 288 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 RRM2P31350 389 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 ICAM3P32942 547 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 XRCC4Q13426 336 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 ITGA9Q13797 1035 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 BMPR2Q13873 1038 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 GALNTL6Q49A17 601 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 ZC3H12AQ5D1E8 599 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 PRR23CQ6ZRP0 262 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 FAM183BPQ6ZVS7 135 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 OR6Y1Q8NGX8 325 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 TLE6Q9H808 572 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 MRPL42Q9Y6G3 142 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 CNOT3O75175 753 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 TRUB2O95900 331 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 PGDP52209 483 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 PRKAA1Q13131 559 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 AGKQ53H12 422 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 EEF1DP3Q658K8 133 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 USP45Q70EL2 814 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 SLC9A9Q8IVB4 645 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 PAIP1Q9H074 479 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 CICQ96RK0 1608 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 TBL1XO60907 577 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 PTPN3P26045 913 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 NME5P56597 212 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 ARF3P61204 181 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 ARF1P84077 181 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 PKN2Q16513 984 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 C9orf57Q5W0N0 161 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 WDR59Q6PJI9 974 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 GLIS3Q8NEA6 775 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 FBXO22Q8NEZ5 403 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 PPP1R10Q96QC0 940 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 CAPN10Q9HC96 672 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 GPAMQ9HCL2 828 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 STK39Q9UEW8 545 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 OR12D3Q9UGF7 316 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 PADI3Q9ULW8 664 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 MEI4A8MW99 385 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 FGFR1P11362 822 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 ATP4AP20648 1035 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 NPY2RP49146 381 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 TGM3Q08188 693 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 MPP3Q13368 585 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 TCHHL1Q5QJ38 904 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 N4BP2L1Q5TBK1 243 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 GRTP1Q5TC63 336 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms