RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 TPGS1Q6ZTW0 290 aa26.7■■□□□ 1.87
ATPAF1-202ENST00000371937 PGBD5Q8N414 524 aa26.7■■□□□ 1.87
ATPAF1-202ENST00000371937 ARFGAP2Q8N6H7 521 aa26.7■■□□□ 1.87
ATPAF1-202ENST00000371937 BHMTQ93088 406 aa26.7■■□□□ 1.87
ATPAF1-202ENST00000371937 TIFAQ96CG3 184 aa26.7■■□□□ 1.87
ATPAF1-202ENST00000371937 PSKH2Q96QS6 385 aa26.7■■□□□ 1.87
ATPAF1-202ENST00000371937 APOL2Q9BQE5 337 aa26.7■■□□□ 1.87
ATPAF1-202ENST00000371937 FICDQ9BVA6 458 aa26.7■■□□□ 1.87
ATPAF1-202ENST00000371937 CINPQ9BW66 212 aaPredicted RBP26.7■■□□□ 1.87
ATPAF1-202ENST00000371937 EURLQ9NYK6 297 aa26.7■■□□□ 1.87
ATPAF1-202ENST00000371937 PRAMEF12O95522 483 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 POLBP06746 335 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 GCAP28676 217 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 CD86P42081 329 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 NIPAL4Q0D2K0 466 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 ZNF77Q15935 545 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 EMC10Q5UCC4 262 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 RNF43Q68DV7 783 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 ARID3BQ8IVW6 561 aaPredicted RBP26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 VN1R2Q8NFZ6 395 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 ING5Q8WYH8 240 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 MRGPRX2Q96LB1 330 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 ZSWIM3Q96MP5 696 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 PLAC1Q9HBJ0 212 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 PSMC3IPQ9P2W1 217 aaPredicted RBP26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 GLDCP23378 1020 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 PRKCHP24723 683 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 MZF1P28698 734 aaPredicted RBP26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 WNT3AP56704 352 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 DSC2Q02487 901 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 NR1H3Q13133 447 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 KBTBD12Q3ZCT8 623 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 ALG1LQ6GMV1 187 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 KDELC1Q6UW63 502 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 RANBP10Q6VN20 620 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 TAOK1Q7L7X3 1001 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 FIBINQ8TAL6 211 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 ARRDC2Q8TBH0 407 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 CTNNAL1Q9UBT7 734 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 TBK1Q9UHD2 729 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 OR51B4Q9Y5P0 310 aa26.69■■□□□ 1.86
ATPAF1-202ENST00000371937 WEE1P30291 646 aa26.68■■□□□ 1.86
ATPAF1-202ENST00000371937 HPDP32754 393 aaPredicted RBP26.68■■□□□ 1.86
ATPAF1-202ENST00000371937 MSH2P43246 934 aa26.68■■□□□ 1.86
ATPAF1-202ENST00000371937 NUMBP49757 651 aa26.68■■□□□ 1.86
ATPAF1-202ENST00000371937 USP4Q13107 963 aa26.68■■□□□ 1.86
ATPAF1-202ENST00000371937 KDM7AQ6ZMT4 941 aa26.68■■□□□ 1.86
ATPAF1-202ENST00000371937 ITFG1Q8TB96 612 aa26.68■■□□□ 1.86
ATPAF1-202ENST00000371937 TADA1Q96BN2 335 aa26.68■■□□□ 1.86
ATPAF1-202ENST00000371937 OTUB2Q96DC9 234 aa26.68■■□□□ 1.86
ATPAF1-202ENST00000371937 PAFAH2Q99487 392 aa26.68■■□□□ 1.86
ATPAF1-202ENST00000371937 SEMA3CQ99985 751 aa26.68■■□□□ 1.86
ATPAF1-202ENST00000371937 MGME1Q9BQP7 344 aa26.68■■□□□ 1.86
ATPAF1-202ENST00000371937 KIF9Q9HAQ2 790 aa26.68■■□□□ 1.86
ATPAF1-202ENST00000371937 KIAA1522Q9P206 1035 aaPredicted RBP26.68■■□□□ 1.86
ATPAF1-202ENST00000371937 IKBKGQ9Y6K9 419 aa26.68■■□□□ 1.86
ATPAF1-202ENST00000371937 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 MMP2P08253 660 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 CES1P23141 567 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 CSKP41240 450 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 CBX2Q14781 532 aaPredicted RBP26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 DCAF4L2Q8NA75 395 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 DHRS4Q9BTZ2 278 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 C2orf49Q9BVC5 232 aaPredicted RBP26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 IGFLR1Q9H665 355 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 RFXAPO00287 272 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 SLC9A3R1O14745 358 aaPredicted RBP26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 ZMPSTE24O75844 475 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 ALDH1A2O94788 518 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 ARF5P84085 180 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 INO80DQ53TQ3 878 aaPredicted RBP26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 SPANXN3Q5MJ09 141 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 CERCAMQ5T4B2 595 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 FYB2Q5VWT5 728 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 ADGRD1Q6QNK2 874 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 CELF5Q8N6W0 485 aaKnown RBP26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 RIN3Q8TB24 985 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 WFDC5Q8TCV5 224 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 TTC17Q96AE7 1141 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 ALG14Q96F25 216 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 ARNT2Q9HBZ2 717 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 PLK2Q9NYY3 685 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 MOCS1Q9NZB8 636 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 RPS6KL1Q9Y6S9 549 aa26.67■■□□□ 1.86
ATPAF1-202ENST00000371937 MUSKO15146 869 aa26.66■■□□□ 1.86
ATPAF1-202ENST00000371937 PPP2R2AP63151 447 aa26.66■■□□□ 1.86
ATPAF1-202ENST00000371937 CRYMQ14894 314 aa26.66■■□□□ 1.86
ATPAF1-202ENST00000371937 EFTUD2Q15029 972 aaKnown RBP eCLIP26.66■■□□□ 1.863e-6■■■■■ 41.9
ATPAF1-202ENST00000371937 TMED2Q15363 201 aa26.66■■□□□ 1.86
ATPAF1-202ENST00000371937 PCSK7Q16549 785 aa26.66■■□□□ 1.86
ATPAF1-202ENST00000371937 DENND5AQ6IQ26 1287 aa26.66■■□□□ 1.86
ATPAF1-202ENST00000371937 TMEM184AQ6ZMB5 413 aa26.66■■□□□ 1.86
ATPAF1-202ENST00000371937 LRRC6Q86X45 466 aa26.66■■□□□ 1.86
ATPAF1-202ENST00000371937 KIAA1958Q8N8K9 716 aa26.66■■□□□ 1.86
ATPAF1-202ENST00000371937 ACDQ96AP0 544 aa26.66■■□□□ 1.86
ATPAF1-202ENST00000371937 MRRFQ96E11 262 aaKnown RBP26.66■■□□□ 1.86
ATPAF1-202ENST00000371937 TRIM56Q9BRZ2 755 aaKnown RBP26.66■■□□□ 1.86
ATPAF1-202ENST00000371937 PDE4DIPQ5VU43 2346 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 FAM237BA0A1B0GVD1 139 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 ATP9BO43861 1147 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms