RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 CD86P42081 329 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 SLC18A1P54219 525 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 ITKQ08881 620 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 MGAT5Q09328 741 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 IL31Q6EBC2 164 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 SH2D5Q6ZV89 423 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 HTR3DQ70Z44 454 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 CCDC117Q8IWD4 279 aaPredicted RBP17.79■□□□□ 0.44
SSBP3-203ENST00000371319 HJURPQ8NCD3 748 aaPredicted RBP17.79■□□□□ 0.44
SSBP3-203ENST00000371319 SHKBP1Q8TBC3 707 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 DENND1AQ8TEH3 1009 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 CERS2Q96G23 380 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 SERAC1Q96JX3 654 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 KIFC1Q9BW19 673 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 SLC46A2Q9BY10 475 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 CFAP97Q9P2B7 532 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 SLC17A6Q9P2U8 582 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 LSM7Q9UK45 103 aaKnown RBP17.79■□□□□ 0.44
SSBP3-203ENST00000371319 ACTL7AQ9Y615 435 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 NOTCH4Q99466 2003 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 TTC24A2A3L6 582 aaPredicted RBP17.79■□□□□ 0.44
SSBP3-203ENST00000371319 GMNCA6NCL1 334 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 FAM47DPA6NHR8 397 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 MOSPD3O75425 235 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 MT-ND3P03897 115 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 CKMP06732 381 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 KRT4P19013 534 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 OXCT1P55809 520 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 NAB1Q13506 487 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 LRRC14Q15048 493 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 ZNF783Q6ZMS7 281 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 RASSF3Q86WH2 238 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.79■□□□□ 0.44
SSBP3-203ENST00000371319 TCEAL4Q96EI5 215 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 SPON2Q9BUD6 331 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 CHRAC1Q9NRG0 131 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 VPS45Q9NRW7 570 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 NKIRAS1Q9NYS0 192 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 DNMT3BQ9UBC3 853 aaKnown RBP17.79■□□□□ 0.44
SSBP3-203ENST00000371319 ATG2AQ2TAZ0 1938 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 DOCK6Q96HP0 2047 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 HMX2A2RU54 273 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 TRIM49D1C9J1S8 452 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 GJB3O75712 270 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 CA3P07451 260 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 SNRPAP09012 282 aaKnown RBP17.78■□□□□ 0.44
SSBP3-203ENST00000371319 ERVK-10P10266 1014 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 NMBRP28336 390 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 PCSK7Q16549 785 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 FSCBQ5H9T9 825 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 PCID2Q5JVF3 399 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 RNF219Q5W0B1 726 aaPredicted RBP17.78■□□□□ 0.44
SSBP3-203ENST00000371319 ALG1LQ6GMV1 187 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 PKN3Q6P5Z2 889 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 BANPQ8N9N5 519 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 BCAS4Q8TDM0 211 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 MFSD3Q96ES6 412 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 KLF6Q99612 283 aaPredicted RBP17.78■□□□□ 0.44
SSBP3-203ENST00000371319 FSD1LQ9BXM9 530 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 ARNT2Q9HBZ2 717 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 MLXIPLQ9NP71 852 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 IL1RAPL1Q9NZN1 696 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 UBA2Q9UBT2 640 aaPredicted RBP17.78■□□□□ 0.44
SSBP3-203ENST00000371319 ZNF510Q9Y2H8 683 aa17.78■□□□□ 0.44
SSBP3-203ENST00000371319 ERICH4A6NGS2 130 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 LEFTY2O00292 366 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 LUC7L3O95232 432 aaKnown RBP17.77■□□□□ 0.44
SSBP3-203ENST00000371319 FGF19O95750 216 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 PTPN2P17706 415 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 HOXA9P31269 272 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 CHRNA4P43681 627 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 SERPINB9P50453 376 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 WDR4P57081 412 aaKnown RBP17.77■□□□□ 0.44
SSBP3-203ENST00000371319 SLC18A2Q05940 514 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 BMPR2Q13873 1038 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 ZNF235Q14590 738 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 SHHQ15465 462 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 PACS1Q6VY07 963 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 KDELC2Q7Z4H8 507 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 CPXM2Q8N436 756 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 CARNMT1Q8N4J0 409 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 CKAP2Q8WWK9 683 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 CDKL2Q92772 493 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 TMA16Q96EY4 203 aaKnown RBP17.77■□□□□ 0.44
SSBP3-203ENST00000371319 SGSM3Q96HU1 749 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 ZNF317Q96PQ6 595 aaPredicted RBP17.77■□□□□ 0.44
SSBP3-203ENST00000371319 SEMA3CQ99985 751 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 MGME1Q9BQP7 344 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 POLR1EQ9GZS1 481 aaKnown RBP17.77■□□□□ 0.44
SSBP3-203ENST00000371319 SMG9Q9H0W8 520 aaKnown RBP17.77■□□□□ 0.44
SSBP3-203ENST00000371319 MRM3Q9HC36 420 aaKnown RBP17.77■□□□□ 0.44
SSBP3-203ENST00000371319 ARHGAP26Q9UNA1 814 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 SH3BP1Q9Y3L3 701 aa17.77■□□□□ 0.44
SSBP3-203ENST00000371319 KRT37O76014 449 aa17.76■□□□□ 0.43
SSBP3-203ENST00000371319 RPA3P35244 121 aaPredicted RBP17.76■□□□□ 0.43
SSBP3-203ENST00000371319 MSLNQ13421 630 aaPredicted RBP17.76■□□□□ 0.43
SSBP3-203ENST00000371319 POU6F1Q14863 301 aa17.76■□□□□ 0.43
SSBP3-203ENST00000371319 CYTH1Q15438 398 aa17.76■□□□□ 0.43
SSBP3-203ENST00000371319 TEAD2Q15562 447 aa17.76■□□□□ 0.43
SSBP3-203ENST00000371319 SMAD1Q15797 465 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms