RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 ALDH2P05091 517 aa13.02□□□□□ -0.33
GPC3-201ENST00000370818 CNTFP26441 200 aa13.02□□□□□ -0.33
GPC3-201ENST00000370818 CD151P48509 253 aa13.02□□□□□ -0.33
GPC3-201ENST00000370818 VEGFBP49765 207 aa13.02□□□□□ -0.33
GPC3-201ENST00000370818 SH3BGRP55822 239 aaPredicted RBP13.02□□□□□ -0.33
GPC3-201ENST00000370818 COG7P83436 770 aa13.02□□□□□ -0.33
GPC3-201ENST00000370818 NRG1Q02297 640 aaPredicted RBP13.02□□□□□ -0.33
GPC3-201ENST00000370818 SPANXN3Q5MJ09 141 aa13.02□□□□□ -0.33
GPC3-201ENST00000370818 SH2D4BQ5SQS7 431 aa13.02□□□□□ -0.33
GPC3-201ENST00000370818 CERCAMQ5T4B2 595 aa13.02□□□□□ -0.33
GPC3-201ENST00000370818 AFMIDQ63HM1 303 aa13.02□□□□□ -0.33
GPC3-201ENST00000370818 NLRP9Q7RTR0 991 aa13.02□□□□□ -0.33
GPC3-201ENST00000370818 NDUFAF2Q8N183 169 aa13.02□□□□□ -0.33
GPC3-201ENST00000370818 ATPAF2Q8N5M1 289 aa13.02□□□□□ -0.33
GPC3-201ENST00000370818 LZTR1Q8N653 840 aa13.02□□□□□ -0.33
GPC3-201ENST00000370818 IQCGQ9H095 443 aaKnown RBP13.02□□□□□ -0.33
GPC3-201ENST00000370818 LRRC40Q9H9A6 602 aa13.02□□□□□ -0.33
GPC3-201ENST00000370818 SLC27A5Q9Y2P5 690 aa13.02□□□□□ -0.33
GPC3-201ENST00000370818 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.01□□□□□ -0.33
GPC3-201ENST00000370818 OR6C75A6NL08 312 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 PITPNM1O00562 1244 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 C2CD2LO14523 706 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 TBC1D4O60343 1298 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 TBX18O95935 607 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 BGNP21810 368 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 CRHR1P34998 444 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 ARPP19P56211 112 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 RTP2Q5QGT7 225 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 SPATA24Q86W54 205 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.01□□□□□ -0.33
GPC3-201ENST00000370818 TET1Q8NFU7 2136 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 SPATA22Q8NHS9 363 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 C1orf74Q96LT6 269 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 MECRQ9BV79 373 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 UNC93B1Q9H1C4 597 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 hCG_2014768A0A024R1R8 64 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 MTMR11A4FU01 709 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 TMEM221A6NGB7 291 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 APLP1P51693 650 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 OVGP1Q12889 678 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 MPP3Q13368 585 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 NAB1Q13506 487 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 FUT10Q6P4F1 479 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 ZNF683Q8IZ20 524 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 RTL3Q8N8U3 475 aaKnown RBP13.01□□□□□ -0.33
GPC3-201ENST00000370818 SEPT8Q92599 483 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 MFSD3Q96ES6 412 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 IL12RB2Q99665 862 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 NPHS2Q9NP85 383 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 MYO16Q9Y6X6 1858 aa13.01□□□□□ -0.33
GPC3-201ENST00000370818 SHROOM3Q8TF72 1996 aa13□□□□□ -0.33
GPC3-201ENST00000370818 MATN3O15232 486 aa13□□□□□ -0.33
GPC3-201ENST00000370818 ATP9BO43861 1147 aa13□□□□□ -0.33
GPC3-201ENST00000370818 USP1O94782 785 aa13□□□□□ -0.33
GPC3-201ENST00000370818 GALTP07902 379 aa13□□□□□ -0.33
GPC3-201ENST00000370818 TPH1P17752 444 aa13□□□□□ -0.33
GPC3-201ENST00000370818 YWHAQP27348 245 aa13□□□□□ -0.33
GPC3-201ENST00000370818 GPR17Q13304 367 aa13□□□□□ -0.33
GPC3-201ENST00000370818 MAP7Q14244 749 aa13□□□□□ -0.33
GPC3-201ENST00000370818 ANKRD20A4Q4UJ75 823 aa13□□□□□ -0.33
GPC3-201ENST00000370818 CES4AQ5XG92 561 aa13□□□□□ -0.33
GPC3-201ENST00000370818 RNF19BQ6ZMZ0 732 aa13□□□□□ -0.33
GPC3-201ENST00000370818 TAS1R1Q7RTX1 841 aa13□□□□□ -0.33
GPC3-201ENST00000370818 RASSF3Q86WH2 238 aa13□□□□□ -0.33
GPC3-201ENST00000370818 BCL7CQ8WUZ0 217 aaPredicted RBP13□□□□□ -0.33
GPC3-201ENST00000370818 STMN2Q93045 179 aa13□□□□□ -0.33
GPC3-201ENST00000370818 ZNF669Q96BR6 464 aaPredicted RBP13□□□□□ -0.33
GPC3-201ENST00000370818 PTCD3Q96EY7 689 aaKnown RBP13□□□□□ -0.33
GPC3-201ENST00000370818 TSSK1BQ9BXA7 367 aa13□□□□□ -0.33
GPC3-201ENST00000370818 NOL6Q9H6R4 1146 aaKnown RBP13□□□□□ -0.33
GPC3-201ENST00000370818 CHRAC1Q9NRG0 131 aa13□□□□□ -0.33
GPC3-201ENST00000370818 ARL8BQ9NVJ2 186 aa13□□□□□ -0.33
GPC3-201ENST00000370818 MAGED2Q9UNF1 606 aaPredicted RBP13□□□□□ -0.33
GPC3-201ENST00000370818 PLXNA3P51805 1871 aa13□□□□□ -0.33
GPC3-201ENST00000370818 WASH4PA8MWX3 477 aa13□□□□□ -0.33
GPC3-201ENST00000370818 TPP1O14773 563 aa13□□□□□ -0.33
GPC3-201ENST00000370818 RNASEH1O60930 286 aaKnown RBP13□□□□□ -0.33
GPC3-201ENST00000370818 MT-CYBP00156 380 aaPredicted RBP13□□□□□ -0.33
GPC3-201ENST00000370818 MYCP01106 439 aaPredicted RBP13□□□□□ -0.33
GPC3-201ENST00000370818 CPB1P15086 417 aa13□□□□□ -0.33
GPC3-201ENST00000370818 TBX4P57082 545 aa13□□□□□ -0.33
GPC3-201ENST00000370818 EFEMP1Q12805 493 aa13□□□□□ -0.33
GPC3-201ENST00000370818 SERBP1Q8NC51 408 aaKnown RBP eCLIP13□□□□□ -0.33
GPC3-201ENST00000370818 FBXO32Q969P5 355 aa13□□□□□ -0.33
GPC3-201ENST00000370818 SCLYQ96I15 445 aa13□□□□□ -0.33
GPC3-201ENST00000370818 IL22Q9GZX6 179 aa13□□□□□ -0.33
GPC3-201ENST00000370818 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13□□□□□ -0.33
GPC3-201ENST00000370818 CLIC5Q9NZA1 410 aa13□□□□□ -0.33
GPC3-201ENST00000370818 LRFN2Q9ULH4 789 aa13□□□□□ -0.33
GPC3-201ENST00000370818 A0A0J9YVX5 310 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 FAM237BA0A1B0GVD1 139 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 KLF11O14901 512 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 GYG2O15488 501 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 PQBP1O60828 265 aaKnown RBP12.99□□□□□ -0.33
GPC3-201ENST00000370818 NPY2RP49146 381 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 PRMT2P55345 433 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 TAF10Q12962 218 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 THOC5Q13769 683 aaKnown RBP12.99□□□□□ -0.33
GPC3-201ENST00000370818 PDE1CQ14123 709 aaPredicted RBP12.99□□□□□ -0.33
GPC3-201ENST00000370818 FRG1Q14331 258 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms