RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 SEMA4BQ9NPR2 832 aaPredicted RBP12.6□□□□□ -0.39
HCFC1-202ENST00000369984 PXMP2Q9NR77 195 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 ARHGAP20Q9P2F6 1191 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 FBXO10Q9UK96 956 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 ZNF879B4DU55 563 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 HAT1O14929 419 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 HOXA2O43364 376 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 ALADP13716 330 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 DNAJB2P25686 324 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 MTTPP55157 894 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 FCGRTP55899 365 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 FAAP100Q0VG06 881 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 GCNT7Q6ZNI0 430 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 MARK2Q7KZI7 788 aaKnown RBP12.59□□□□□ -0.39
HCFC1-202ENST00000369984 SENP6Q9GZR1 1112 aaPredicted RBP12.59□□□□□ -0.39
HCFC1-202ENST00000369984 RSPH9Q9H1X1 276 aaPredicted RBP12.59□□□□□ -0.39
HCFC1-202ENST00000369984 MARK1Q9P0L2 795 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 CYP2A6P11509 494 aaPredicted RBP12.59□□□□□ -0.39
HCFC1-202ENST00000369984 INTS11Q5TA45 600 aaKnown RBP12.59□□□□□ -0.39
HCFC1-202ENST00000369984 DET1Q7L5Y6 550 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 AADATQ8N5Z0 425 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 LRRC17Q8N6Y2 441 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 AKAP7Q9P0M2 348 aaPredicted RBP12.59□□□□□ -0.39
HCFC1-202ENST00000369984 SNX6Q9UNH7 406 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 KRT36O76013 467 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 GMFBP60983 142 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 PDK3Q15120 406 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 LENG1Q96BZ8 264 aaPredicted RBP12.59□□□□□ -0.39
HCFC1-202ENST00000369984 TMCO1Q9UM00 188 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 SLC25A12O75746 678 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 MYL4P12829 197 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 CBX5P45973 191 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 ARHGAP36Q6ZRI8 547 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 MSANTD1Q6ZTZ1 278 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 SPATA20Q8TB22 786 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 ZKSCAN4Q969J2 545 aaPredicted RBP12.59□□□□□ -0.39
HCFC1-202ENST00000369984 VPS35Q96QK1 796 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 C1QTNF7Q9BXJ2 289 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 RNPEPL1Q9HAU8 725 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 PFDN2Q9UHV9 154 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 ANKDD1BA6NHY2 528 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 ADSSP30520 456 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 MSLNQ13421 630 aaPredicted RBP12.59□□□□□ -0.39
HCFC1-202ENST00000369984 DOK6Q6PKX4 331 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 USP45Q70EL2 814 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 STK40Q8N2I9 435 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 KAT5Q92993 513 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 COX4I2Q96KJ9 171 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 SLC4A5Q9BY07 1137 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 SNTG2Q9NY99 539 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 PRELID1Q9Y255 219 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 TELO2Q9Y4R8 837 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 FRMPD1Q5SYB0 1578 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 CDH3P22223 829 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 SQLEQ14534 574 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 HPS6Q86YV9 775 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 DAW1Q8N136 415 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 DEFB129Q9H1M3 183 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 RSL24D1Q9UHA3 163 aaKnown RBP12.59□□□□□ -0.39
HCFC1-202ENST00000369984 SNRPB2P08579 225 aaKnown RBP12.59□□□□□ -0.39
HCFC1-202ENST00000369984 PTGS2P35354 604 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 ZNF280DQ6N043 979 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 PARP8Q8N3A8 854 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 DNAJB14Q8TBM8 379 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 TATDN2Q93075 761 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 GAL3ST3Q96A11 431 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 SIPA1Q96FS4 1042 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 XPNPEP3Q9NQH7 507 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 GDF3Q9NR23 364 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 THG1LQ9NWX6 298 aaKnown RBP12.59□□□□□ -0.39
HCFC1-202ENST00000369984 NINJ2Q9NZG7 142 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 SAE1Q9UBE0 346 aaPredicted RBP12.59□□□□□ -0.39
HCFC1-202ENST00000369984 RAB23Q9ULC3 237 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 EFR3BQ9Y2G0 817 aa12.59□□□□□ -0.39
HCFC1-202ENST00000369984 USP17L7P0C7H9 530 aa12.58□□□□□ -0.39
HCFC1-202ENST00000369984 CXXC5Q7LFL8 322 aaKnown RBP12.58□□□□□ -0.39
HCFC1-202ENST00000369984 SUN5Q8TC36 379 aa12.58□□□□□ -0.39
HCFC1-202ENST00000369984 ALG9Q9H6U8 611 aa12.58□□□□□ -0.39
HCFC1-202ENST00000369984 PTGFRNQ9P2B2 879 aa12.58□□□□□ -0.39
HCFC1-202ENST00000369984 ATPIF1Q9UII2 106 aa12.58□□□□□ -0.39
HCFC1-202ENST00000369984 PCDHB12Q9Y5F1 795 aa12.58□□□□□ -0.39
HCFC1-202ENST00000369984 FARP2O94887 1054 aaPredicted RBP12.58□□□□□ -0.4
HCFC1-202ENST00000369984 HMGCRP04035 888 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 AMPD1P23109 780 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 OMPP47874 163 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 PRKAG1P54619 331 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 FAM171BQ6P995 826 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 PCDH20Q8N6Y1 951 aaKnown RBP12.58□□□□□ -0.4
HCFC1-202ENST00000369984 GSDMCQ9BYG8 508 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 TNPO3Q9Y5L0 923 aaKnown RBP12.58□□□□□ -0.4
HCFC1-202ENST00000369984 IGSF6O95976 241 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 ARP10275 920 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 MMP13P45452 471 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 SLC15A2Q16348 729 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 CRY1Q16526 586 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 SCAIQ8N9R8 606 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 VCPIP1Q96JH7 1222 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 BHLHE41Q9C0J9 482 aaPredicted RBP12.58□□□□□ -0.4
HCFC1-202ENST00000369984 ATXN3LQ9H3M9 355 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 FBXO28Q9NVF7 368 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms