RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 NELFEP18615 380 aaKnown RBP18.36■□□□□ 0.53
SNX27-202ENST00000368841 SERPINA4P29622 427 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.36■□□□□ 0.53
SNX27-202ENST00000368841 PLPP4Q5VZY2 271 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 NAIF1Q69YI7 327 aaPredicted RBP18.36■□□□□ 0.53
SNX27-202ENST00000368841 IQCF2Q8IXL9 164 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 FAM84AQ96KN4 292 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 PTPN1P18031 435 aaKnown RBP18.36■□□□□ 0.53
SNX27-202ENST00000368841 WASP42768 502 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 VGLL4Q14135 290 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 FAM151BQ6UXP7 276 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 DEF8Q6ZN54 512 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 DNAJC18Q9H819 358 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 EQTNQ9NQ60 294 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 RPN2P04844 631 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 RPL38P63173 70 aaKnown RBP18.36■□□□□ 0.53
SNX27-202ENST00000368841 MYLPFQ96A32 169 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 PDCD10Q9BUL8 212 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 UGT2B28Q9BY64 529 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 NFASCO94856 1347 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 WNT10BO00744 389 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 NCAM2O15394 837 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 GRIA3P42263 894 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 PYDC2Q56P42 97 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 C12orf29Q8N999 325 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 CEP44Q9C0F1 390 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 SLC25A12O75746 678 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 COPZ1P61923 177 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 IKBKEQ14164 716 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 FAM9CQ8IZT9 166 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 ZCCHC7Q8N3Z6 543 aaKnown RBP18.36■□□□□ 0.53
SNX27-202ENST00000368841 EPS8L2Q9H6S3 715 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 REEP1Q9H902 201 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 ANAPC2Q9UJX6 822 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 PXDNLA1KZ92 1463 aa18.36■□□□□ 0.53
SNX27-202ENST00000368841 PNPLA6Q8IY17 1366 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 ISM1B1AKI9 464 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 C4BPBP20851 252 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 TMC3Q7Z5M5 1100 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 HIPK1Q86Z02 1210 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 UXTQ9UBK9 157 aaPredicted RBP18.35■□□□□ 0.53
SNX27-202ENST00000368841 SPATA31A6Q5VVP1 1343 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 RAB27AP51159 221 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 FNBP1LQ5T0N5 605 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 PAPD7Q5XG87 772 aaKnown RBP18.35■□□□□ 0.53
SNX27-202ENST00000368841 RPTNQ6XPR3 784 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 OR4A15Q8NGL6 344 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 CENPIQ92674 756 aaPredicted RBP18.35■□□□□ 0.53
SNX27-202ENST00000368841 NEUROD4Q9HD90 331 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 NKRFO15226 690 aaKnown RBP eCLIP18.35■□□□□ 0.53
SNX27-202ENST00000368841 AVILO75366 819 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 ACSM2AQ08AH3 577 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 ACSM2BQ68CK6 577 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 PACS1Q6VY07 963 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 EIF3MQ7L2H7 374 aaKnown RBP18.35■□□□□ 0.53
SNX27-202ENST00000368841 CHPFQ8IZ52 775 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 PNPT1Q8TCS8 783 aaKnown RBP18.35■□□□□ 0.53
SNX27-202ENST00000368841 WTIPA6NIX2 430 aaPredicted RBP18.35■□□□□ 0.53
SNX27-202ENST00000368841 GTPBP1O00178 669 aaKnown RBP18.35■□□□□ 0.53
SNX27-202ENST00000368841 SMIM10L2AP0DMW4 78 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 SMIM10L2BP0DMW5 78 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 GZMAP12544 262 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 ZNF24P17028 368 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 SPIBQ01892 262 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 SVOPQ8N4V2 548 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 NEK7Q8TDX7 302 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 CNGB3Q9NQW8 809 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 ABCC13Q9NSE7 274 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 MADDQ8WXG6 1647 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 ITSN1Q15811 1721 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 PTPRAP18433 802 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 ITGADQ13349 1161 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 PPIL2Q13356 520 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 SERPINA13PQ6UXR4 307 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 TTC7BQ86TV6 843 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 ACTRT2Q8TDY3 377 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 OSCP1Q8WVF1 389 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 EHD4Q9H223 541 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 GNPTGQ9UJJ9 305 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 ERAL1O75616 437 aaKnown RBP18.35■□□□□ 0.53
SNX27-202ENST00000368841 CASP5P51878 434 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 PTGR2Q8N8N7 351 aaPredicted RBP18.35■□□□□ 0.53
SNX27-202ENST00000368841 NDRG1Q92597 394 aaKnown RBP18.35■□□□□ 0.53
SNX27-202ENST00000368841 PANX3Q96QZ0 392 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 TNFSF13BQ9Y275 285 aa18.35■□□□□ 0.53
SNX27-202ENST00000368841 LIN7AO14910 233 aaPredicted RBP18.34■□□□□ 0.53
SNX27-202ENST00000368841 ATP5BP06576 529 aaKnown RBP18.34■□□□□ 0.53
SNX27-202ENST00000368841 DGKAP23743 735 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 SEC13P55735 322 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 ZNF844Q08AG5 666 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 SEMA5AQ13591 1074 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 GNA13Q14344 377 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 CLEC17AQ6ZS10 378 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 KIAA0408Q6ZU52 694 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 CLHC1Q8NHS4 586 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 RERGQ96A58 199 aaPredicted RBP18.34■□□□□ 0.53
SNX27-202ENST00000368841 NEDD8-MDP1E9PL57 170 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 ATP5C1P36542 298 aaKnown RBP18.34■□□□□ 0.53
SNX27-202ENST00000368841 BUD31P41223 144 aaPredicted RBP18.34■□□□□ 0.53
SNX27-202ENST00000368841 FSTL1Q12841 308 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms