RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 WBP2Q969T9 261 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 MCUR1Q96AQ8 359 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 CCDC97Q96F63 343 aaPredicted RBP10.83□□□□□ -0.68
TPM3-212ENST00000368533 FUBP3Q96I24 572 aaKnown RBP eCLIP10.83□□□□□ -0.68
TPM3-212ENST00000368533 MECRQ9BV79 373 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 FBXO44Q9H4M3 255 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 SCML2Q9UQR0 700 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 TDRKHQ9Y2W6 561 aaKnown RBP10.83□□□□□ -0.68
TPM3-212ENST00000368533 E9PAM4 449 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 ZBTB24O43167 697 aaPredicted RBP10.83□□□□□ -0.68
TPM3-212ENST00000368533 STK10O94804 968 aaKnown RBP10.83□□□□□ -0.68
TPM3-212ENST00000368533 F9P00740 461 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 URODP06132 367 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 GSTA2P09210 222 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 TPH1P17752 444 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 SERPINB3P29508 390 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 ETFBP38117 255 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 SKIV2L2P42285 1042 aaKnown RBP10.83□□□□□ -0.68
TPM3-212ENST00000368533 GLUD2P49448 558 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 TMPRSS15P98073 1019 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 ELAVL2Q12926 359 aaKnown RBP10.83□□□□□ -0.68
TPM3-212ENST00000368533 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.83□□□□□ -0.68
TPM3-212ENST00000368533 MROH9Q5TGP6 573 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 TMC7Q7Z402 723 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 SDCCAG8Q86SQ7 713 aaPredicted RBP10.83□□□□□ -0.68
TPM3-212ENST00000368533 SPATA22Q8NHS9 363 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 SPPL2BQ8TCT7 592 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 IRGQQ8WZA9 623 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 AZIN2Q96A70 460 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 MPP4Q96JB8 637 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 C8orf48Q96LL4 319 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 KLHL5Q96PQ7 755 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 QKIQ96PU8 341 aaKnown RBP eCLIP10.83□□□□□ -0.688e-8■■■■■ 32.5
TPM3-212ENST00000368533 SLC22A12Q96S37 553 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 CADM1Q9BY67 442 aaKnown RBP10.83□□□□□ -0.68
TPM3-212ENST00000368533 SMOC2Q9H3U7 446 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 H7C4K7 107 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 TEX28O15482 410 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 GJB3O75712 270 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 USP1O94782 785 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 CPA2P48052 419 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 SLC18A1P54219 525 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 MAXP61244 160 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 LGSNQ5TDP6 509 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 ZNF697Q5TEC3 545 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 CLNKQ7Z7G1 428 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 HOMEZQ8IX15 550 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 SLC39A11Q8N1S5 342 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 IGSF8Q969P0 613 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 PRR11Q96HE9 360 aaPredicted RBP10.82□□□□□ -0.68
TPM3-212ENST00000368533 ZNF419Q96HQ0 510 aaPredicted RBP10.82□□□□□ -0.68
TPM3-212ENST00000368533 RPRD1AQ96P16 312 aaPredicted RBP10.82□□□□□ -0.68
TPM3-212ENST00000368533 TMEM175Q9BSA9 504 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 TMEM120AQ9BXJ8 343 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 MCOLN1Q9GZU1 580 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 VPS11Q9H270 941 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 TLR8Q9NR97 1041 aaKnown RBP10.82□□□□□ -0.68
TPM3-212ENST00000368533 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.82□□□□□ -0.68
TPM3-212ENST00000368533 ABHD14A-ACY1A0A1B0GW23 586 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 CXorf49A8MYA2 514 aaPredicted RBP10.82□□□□□ -0.68
TPM3-212ENST00000368533 E7ESA3 106 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 NRG2O14511 850 aaPredicted RBP10.82□□□□□ -0.68
TPM3-212ENST00000368533 GYG2O15488 501 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 TBC1D4O60343 1298 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 UGT1A9O60656 530 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 OPHN1O60890 802 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 FGF18O76093 207 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 SOD2P04179 222 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 MYL2P10916 166 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 PLOD1Q02809 727 aaPredicted RBP10.82□□□□□ -0.68
TPM3-212ENST00000368533 WASHC5Q12768 1159 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 SEMA3BQ13214 749 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 LIN52Q52LA3 116 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 PLPP4Q5VZY2 271 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 FAM109BQ6ICB4 259 aaPredicted RBP10.82□□□□□ -0.68
TPM3-212ENST00000368533 RGS9BPQ6ZS82 235 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 SLC26A11Q86WA9 606 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 CHSY1Q86X52 802 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 DENND1CQ8IV53 801 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 SLC44A1Q8WWI5 657 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 APOPT1Q96IL0 206 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 OLFM3Q96PB7 478 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 SRPK1Q96SB4 655 aaKnown RBP10.82□□□□□ -0.68
TPM3-212ENST00000368533 SLC39A8Q9C0K1 460 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 SMG9Q9H0W8 520 aaKnown RBP10.82□□□□□ -0.68
TPM3-212ENST00000368533 UGT1A7Q9HAW7 530 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 UGT1A10Q9HAW8 530 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 UGT1A8Q9HAW9 530 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 SPG21Q9NZD8 308 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 ARMCX1Q9P291 453 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 MTRRQ9UBK8 725 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 BCLAF3A2AJT9 711 aaKnown RBP10.82□□□□□ -0.68
TPM3-212ENST00000368533 TPD52L2O43399 206 aaKnown RBP10.82□□□□□ -0.68
TPM3-212ENST00000368533 MT-CYBP00156 380 aaPredicted RBP10.82□□□□□ -0.68
TPM3-212ENST00000368533 SNRPAP09012 282 aaKnown RBP10.82□□□□□ -0.68
TPM3-212ENST00000368533 ESRRAP11474 423 aaPredicted RBP10.82□□□□□ -0.68
TPM3-212ENST00000368533 ZFXP17010 805 aaPredicted RBP10.82□□□□□ -0.68
TPM3-212ENST00000368533 GALK1P51570 392 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 KCNJ11Q14654 390 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 TTC39BQ5VTQ0 682 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms