RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 KLHDC10Q6PID8 442 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 TPGS1Q6ZTW0 290 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 NUDT18Q6ZVK8 323 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 SCD5Q86SK9 330 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 METTL3Q86U44 580 aaKnown RBP10.22□□□□□ -0.77
TPM3-210ENST00000368530 CHPFQ8IZ52 775 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 ATL2Q8NHH9 583 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 GRK7Q8WTQ7 553 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 DNASE2BQ8WZ79 361 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 SEC14L1Q92503 715 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 HSPA12BQ96MM6 686 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 MAK16Q9BXY0 300 aaKnown RBP10.22□□□□□ -0.77
TPM3-210ENST00000368530 MAGEB5Q9BZ81 275 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 ACBD3Q9H3P7 528 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 FBXO44Q9H4M3 255 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 C10orf88Q9H8K7 445 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 TLR8Q9NR97 1041 aaKnown RBP10.22□□□□□ -0.77
TPM3-210ENST00000368530 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.22□□□□□ -0.77
TPM3-210ENST00000368530 CACNA2D2Q9NY47 1150 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 GRHL1Q9NZI5 618 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 NUDT5Q9UKK9 219 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 NAALADL1Q9UQQ1 740 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 ZNF148Q9UQR1 794 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 LAMA5O15230 3695 aa10.21□□□□□ -0.77
TPM3-210ENST00000368530 ADAMTS9Q9P2N4 1935 aa10.21□□□□□ -0.77
TPM3-210ENST00000368530 YJEFN3A6XGL0 299 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 E7ENQ6 273 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 H3BQF6 201 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 CAPN9O14815 690 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 MDM4O15151 490 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 CBFA2T3O75081 653 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 FBXO21O94952 628 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 ARSEP51690 589 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 ATXN3P54252 364 aaPredicted RBP10.21□□□□□ -0.78
TPM3-210ENST00000368530 OTUD4Q01804 1114 aaKnown RBP10.21□□□□□ -0.78
TPM3-210ENST00000368530 NME3Q13232 169 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 PTK6Q13882 451 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 DPYSL3Q14195 570 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 TAZQ16635 292 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 BOLA3Q53S33 107 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 OTUD1Q5VV17 481 aaPredicted RBP10.21□□□□□ -0.78
TPM3-210ENST00000368530 ZDHHC24Q6UX98 284 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 NPNTQ6UXI9 565 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 BBS12Q6ZW61 710 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 RABEPKQ7Z6M1 372 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 FAM131BQ86XD5 332 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 PROSER1Q86XN7 944 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 HDDC3Q8N4P3 179 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 ZNF276Q8N554 614 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 CCDC185Q8N715 623 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 ADAM32Q8TC27 787 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 TEKT4Q8WW24 435 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 EDEM1Q92611 657 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 CENPIQ92674 756 aaPredicted RBP10.21□□□□□ -0.78
TPM3-210ENST00000368530 XPO6Q96QU8 1125 aaKnown RBP10.21□□□□□ -0.78
TPM3-210ENST00000368530 MKRN2Q9H000 416 aaKnown RBP10.21□□□□□ -0.78
TPM3-210ENST00000368530 DHX35Q9H5Z1 703 aaKnown RBP10.21□□□□□ -0.78
TPM3-210ENST00000368530 PCDH18Q9HCL0 1135 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 ITM2CQ9NQX7 267 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 ZDHHC18Q9NUE0 388 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 WSB2Q9NYS7 404 aaPredicted RBP10.21□□□□□ -0.78
TPM3-210ENST00000368530 SLC27A6Q9Y2P4 619 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 PCDHGA4Q9Y5G9 962 aa10.21□□□□□ -0.78
TPM3-210ENST00000368530 ANKRD11Q6UB99 2663 aaPredicted RBP10.2□□□□□ -0.78
TPM3-210ENST00000368530 A0A1W2PQH9 124 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 M0QYT0 321 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 STC2O76061 302 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 ZBED1O96006 694 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 PENKP01210 267 aaPredicted RBP10.2□□□□□ -0.78
TPM3-210ENST00000368530 KRT14P02533 472 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 FYNP06241 537 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 SYPP08247 313 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 ZSCAN5DPP0CG00 497 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 RARGP13631 454 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 ETS1P14921 441 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 PECAM1P16284 738 aaPredicted RBP10.2□□□□□ -0.78
TPM3-210ENST00000368530 OAS2P29728 719 aaKnown RBP10.2□□□□□ -0.78
TPM3-210ENST00000368530 NOS2P35228 1153 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 ADCY8P40145 1251 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 DGKGP49619 791 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 BNC1Q01954 994 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 GPS2Q13227 327 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 HNRNPDQ14103 355 aaKnown RBP10.2□□□□□ -0.78
TPM3-210ENST00000368530 TRIP6Q15654 476 aaKnown RBP10.2□□□□□ -0.78
TPM3-210ENST00000368530 ZNF423Q2M1K9 1284 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 SLC25A52Q3SY17 297 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 FUT11Q495W5 492 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 RAB41Q5JT25 222 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 ERMARDQ5T6L9 678 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 FYB2Q5VWT5 728 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 SDE2Q6IQ49 451 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 SYDE1Q6ZW31 735 aaPredicted RBP10.2□□□□□ -0.78
TPM3-210ENST00000368530 B4GALNT4Q76KP1 1039 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 ARCQ7LC44 396 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 EIF1ADQ8N9N8 165 aaKnown RBP10.2□□□□□ -0.78
TPM3-210ENST00000368530 C1orf216Q8TAB5 229 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 ACTL9Q8TC94 416 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 FBXO25Q8TCJ0 367 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.2□□□□□ -0.78
TPM3-210ENST00000368530 ADAMTS14Q8WXS8 1223 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms