RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 BOLA3Q53S33 107 aa24.36■■□□□ 1.49
PFDN2-201ENST00000368010 CNGA4Q8IV77 575 aa24.36■■□□□ 1.49
PFDN2-201ENST00000368010 PLPP6Q8IY26 295 aa24.36■■□□□ 1.49
PFDN2-201ENST00000368010 RYBPQ8N488 228 aaPredicted RBP24.36■■□□□ 1.49
PFDN2-201ENST00000368010 OR2I1PQ8NGU4 316 aa24.36■■□□□ 1.49
PFDN2-201ENST00000368010 CTNNBL1Q8WYA6 563 aaPredicted RBP24.36■■□□□ 1.49
PFDN2-201ENST00000368010 BTBD6Q96KE9 485 aa24.36■■□□□ 1.49
PFDN2-201ENST00000368010 TRIM5Q9C035 493 aa24.36■■□□□ 1.49
PFDN2-201ENST00000368010 CHD5Q8TDI0 1954 aa24.36■■□□□ 1.49
PFDN2-201ENST00000368010 MED19A0JLT2 244 aaPredicted RBP24.35■■□□□ 1.49
PFDN2-201ENST00000368010 MYO1FO00160 1098 aa24.35■■□□□ 1.49
PFDN2-201ENST00000368010 LEFTY1O75610 366 aa24.35■■□□□ 1.49
PFDN2-201ENST00000368010 GSRP00390 522 aa24.35■■□□□ 1.49
PFDN2-201ENST00000368010 IL1R2P27930 398 aa24.35■■□□□ 1.49
PFDN2-201ENST00000368010 ADKP55263 362 aaKnown RBP24.35■■□□□ 1.49
PFDN2-201ENST00000368010 SNRPD1P62314 119 aaKnown RBP24.35■■□□□ 1.49
PFDN2-201ENST00000368010 SERINC3Q13530 473 aa24.35■■□□□ 1.49
PFDN2-201ENST00000368010 SMTNL2Q2TAL5 461 aa24.35■■□□□ 1.49
PFDN2-201ENST00000368010 ASTE1Q2TB18 679 aaPredicted RBP24.35■■□□□ 1.49
PFDN2-201ENST00000368010 KCNT1Q5JUK3 1230 aa24.35■■□□□ 1.49
PFDN2-201ENST00000368010 PIP5KL1Q5T9C9 394 aa24.35■■□□□ 1.49
PFDN2-201ENST00000368010 IL27RAQ6UWB1 636 aa24.35■■□□□ 1.49
PFDN2-201ENST00000368010 OR2AP1Q8NGE2 309 aa24.35■■□□□ 1.49
PFDN2-201ENST00000368010 ZNF564Q8TBZ8 553 aaPredicted RBP24.35■■□□□ 1.49
PFDN2-201ENST00000368010 ARRDC3Q96B67 414 aa24.35■■□□□ 1.49
PFDN2-201ENST00000368010 LRRC19Q9H756 370 aa24.35■■□□□ 1.49
PFDN2-201ENST00000368010 ZWILCHQ9H900 591 aa24.35■■□□□ 1.49
PFDN2-201ENST00000368010 DNAAF2Q9NVR5 837 aaKnown RBP24.35■■□□□ 1.49
PFDN2-201ENST00000368010 A0A1B0GVT2 93 aa24.34■■□□□ 1.49
PFDN2-201ENST00000368010 H3BRJ5 948 aa24.34■■□□□ 1.49
PFDN2-201ENST00000368010 TMCC1O94876 653 aa24.34■■□□□ 1.49
PFDN2-201ENST00000368010 H2AFZP0C0S5 128 aa24.34■■□□□ 1.49
PFDN2-201ENST00000368010 TCF4P15884 667 aa24.34■■□□□ 1.49
PFDN2-201ENST00000368010 ERCC2P18074 760 aa24.34■■□□□ 1.49
PFDN2-201ENST00000368010 HCAR3P49019 387 aa24.34■■□□□ 1.49
PFDN2-201ENST00000368010 CSNK1EP49674 416 aaKnown RBP24.34■■□□□ 1.49
PFDN2-201ENST00000368010 PPP2CBP62714 309 aa24.34■■□□□ 1.49
PFDN2-201ENST00000368010 RACK1P63244 317 aaKnown RBP24.34■■□□□ 1.49
PFDN2-201ENST00000368010 PPP2CAP67775 309 aa24.34■■□□□ 1.49
PFDN2-201ENST00000368010 DPYSL2Q16555 572 aa24.34■■□□□ 1.49
PFDN2-201ENST00000368010 INO80DQ53TQ3 878 aaPredicted RBP24.34■■□□□ 1.49
PFDN2-201ENST00000368010 H2AFVQ71UI9 128 aa24.34■■□□□ 1.49
PFDN2-201ENST00000368010 ERN2Q76MJ5 926 aaKnown RBP24.34■■□□□ 1.49
PFDN2-201ENST00000368010 ADAT2Q7Z6V5 191 aaKnown RBP24.34■■□□□ 1.49
PFDN2-201ENST00000368010 HSPH1Q92598 858 aa24.34■■□□□ 1.49
PFDN2-201ENST00000368010 CELF6Q96J87 481 aaKnown RBP24.34■■□□□ 1.49
PFDN2-201ENST00000368010 SLC6A18Q96N87 628 aa24.34■■□□□ 1.49
PFDN2-201ENST00000368010 KLC2Q9H0B6 622 aa24.34■■□□□ 1.49
PFDN2-201ENST00000368010 ZDHHC6Q9H6R6 413 aa24.34■■□□□ 1.49
PFDN2-201ENST00000368010 PREBQ9HCU5 417 aa24.34■■□□□ 1.49
PFDN2-201ENST00000368010 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.34■■□□□ 1.49
PFDN2-201ENST00000368010 CTTNBP2NLQ9P2B4 639 aa24.34■■□□□ 1.49
PFDN2-201ENST00000368010 AKR1B15C9JRZ8 316 aaPredicted RBP24.33■■□□□ 1.49
PFDN2-201ENST00000368010 RNF103O00237 685 aa24.33■■□□□ 1.49
PFDN2-201ENST00000368010 LATO43561 262 aa24.33■■□□□ 1.49
PFDN2-201ENST00000368010 KCNK5O95279 499 aa24.33■■□□□ 1.49
PFDN2-201ENST00000368010 CER1O95813 267 aa24.33■■□□□ 1.49
PFDN2-201ENST00000368010 CSRP1P21291 193 aaKnown RBP24.33■■□□□ 1.49
PFDN2-201ENST00000368010 ARL4AP40617 200 aa24.33■■□□□ 1.49
PFDN2-201ENST00000368010 PRPF39Q86UA1 669 aaKnown RBP24.33■■□□□ 1.49
PFDN2-201ENST00000368010 OR6K2Q8NGY2 324 aa24.33■■□□□ 1.49
PFDN2-201ENST00000368010 TEKT4Q8WW24 435 aa24.33■■□□□ 1.49
PFDN2-201ENST00000368010 LRIG1Q96JA1 1093 aa24.33■■□□□ 1.49
PFDN2-201ENST00000368010 CCDC42Q96M95 316 aa24.33■■□□□ 1.49
PFDN2-201ENST00000368010 CHP1Q99653 195 aa24.33■■□□□ 1.49
PFDN2-201ENST00000368010 PACSIN1Q9BY11 444 aa24.33■■□□□ 1.49
PFDN2-201ENST00000368010 HDAC8Q9BY41 377 aa24.33■■□□□ 1.49
PFDN2-201ENST00000368010 EBF2Q9HAK2 575 aa24.33■■□□□ 1.49
PFDN2-201ENST00000368010 CWC15Q9P013 229 aaKnown RBP24.33■■□□□ 1.49
PFDN2-201ENST00000368010 UVRAGQ9P2Y5 699 aa24.33■■□□□ 1.49
PFDN2-201ENST00000368010 ADAMTS9Q9P2N4 1935 aa24.32■■□□□ 1.48
PFDN2-201ENST00000368010 CACNA1EQ15878 2313 aa24.32■■□□□ 1.48
PFDN2-201ENST00000368010 ARHGAP42A6NI28 874 aa24.32■■□□□ 1.48
PFDN2-201ENST00000368010 RARAP10276 462 aa24.32■■□□□ 1.48
PFDN2-201ENST00000368010 ITGB7P26010 798 aa24.32■■□□□ 1.48
PFDN2-201ENST00000368010 NUDT1P36639 197 aa24.32■■□□□ 1.48
PFDN2-201ENST00000368010 NOVA1P51513 510 aaKnown RBP24.32■■□□□ 1.48
PFDN2-201ENST00000368010 NEK3P51956 506 aa24.32■■□□□ 1.48
PFDN2-201ENST00000368010 TAS2R38P59533 333 aa24.32■■□□□ 1.48
PFDN2-201ENST00000368010 RHOAP61586 193 aa24.32■■□□□ 1.48
PFDN2-201ENST00000368010 BNC1Q01954 994 aa24.32■■□□□ 1.48
PFDN2-201ENST00000368010 SLC25A11Q02978 314 aaKnown RBP24.32■■□□□ 1.48
PFDN2-201ENST00000368010 TBX2Q13207 712 aaPredicted RBP24.32■■□□□ 1.48
PFDN2-201ENST00000368010 TRIM69Q86WT6 500 aa24.32■■□□□ 1.48
PFDN2-201ENST00000368010 GDAP1L1Q96MZ0 367 aa24.32■■□□□ 1.48
PFDN2-201ENST00000368010 SLC39A8Q9C0K1 460 aa24.32■■□□□ 1.48
PFDN2-201ENST00000368010 NHEJ1Q9H9Q4 299 aaPredicted RBP24.32■■□□□ 1.48
PFDN2-201ENST00000368010 AASDHPPTQ9NRN7 309 aa24.32■■□□□ 1.48
PFDN2-201ENST00000368010 UBA2Q9UBT2 640 aaPredicted RBP24.32■■□□□ 1.48
PFDN2-201ENST00000368010 KRIT1O00522 736 aa24.31■■□□□ 1.48
PFDN2-201ENST00000368010 IGSF6O95976 241 aa24.31■■□□□ 1.48
PFDN2-201ENST00000368010 TMEM253P0C7T8 217 aa24.31■■□□□ 1.48
PFDN2-201ENST00000368010 SSR1P43307 286 aaKnown RBP24.31■■□□□ 1.48
PFDN2-201ENST00000368010 SLC14A1Q13336 389 aa24.31■■□□□ 1.48
PFDN2-201ENST00000368010 DPYSQ14117 519 aa24.31■■□□□ 1.48
PFDN2-201ENST00000368010 HADHQ16836 314 aaKnown RBP24.31■■□□□ 1.48
PFDN2-201ENST00000368010 KIF19Q2TAC6 998 aa24.31■■□□□ 1.48
PFDN2-201ENST00000368010 PSAPL1Q6NUJ1 521 aa24.31■■□□□ 1.48
PFDN2-201ENST00000368010 NEK5Q6P3R8 708 aa24.31■■□□□ 1.48
PFDN2-201ENST00000368010 LAYNQ6UX15 382 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms