RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 PMM1Q92871 262 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 C18orf25Q96B23 403 aaPredicted RBP11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 KIAA0556O60303 1618 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 KRT33AO76009 404 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 ENDOUP21128 410 aaKnown RBP11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 RCVRNP35243 200 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 CLK2P49760 499 aaKnown RBP11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 MAPK12P53778 367 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 ARHGAP15Q53QZ3 475 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 FAR2Q96K12 515 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 MALT1Q9UDY8 824 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 CAMSAP1Q5T5Y3 1602 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 RNF17Q9BXT8 1623 aaKnown RBP11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 FAM149AA5PLN7 773 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 CLPXO76031 633 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 ASS1P00966 412 aaKnown RBP11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 ETS1P14921 441 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 MYL12AP19105 171 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 ACSBG2Q5FVE4 666 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 ERO1BQ86YB8 467 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 EID3Q8N140 333 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 PRAMEF33A0A0G2JMD5 474 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 MAGEB16A2A368 324 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 PRAMEF10O60809 474 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 TBX10O75333 385 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 RLN1P04808 185 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 TMEM139Q8IV31 216 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 SH3BP4Q9P0V3 963 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 RPL26L1Q9UNX3 145 aaKnown RBP11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 CCNB1P14635 433 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 ITGB6P18564 788 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 ACOT2P49753 483 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 CCNG1P51959 295 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 TMEM179Q6ZVK1 233 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 PODNQ7Z5L7 613 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 STRA8Q7Z7C7 330 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 HPS6Q86YV9 775 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 SPAG16Q8N0X2 631 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 PLEKHO2Q8TD55 490 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 MCOLN3Q8TDD5 553 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 IQGAP1P46940 1657 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 ABCG1P45844 678 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 RPA4Q13156 261 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 HLA-DQA1Q5Y7H0 255 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 C3orf58Q8NDZ4 430 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 HOXC10Q9NYD6 342 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 LYVE1Q9Y5Y7 322 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 MAGI3Q5TCQ9 1506 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 VPS26AO75436 327 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 MAP3K6O95382 1288 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 PCCAP05165 728 aaPredicted RBP11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 HNF4AP41235 474 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 HERC3Q15034 1050 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 TTLL9Q3SXZ7 439 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 ATP13A4Q4VNC1 1196 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 ZNF605Q86T29 641 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 EMC1Q8N766 993 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 NEDD1Q8NHV4 660 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 RAPGEFL1Q9UHV5 662 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 MYOCOSA0A1B0GUC4 107 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 OR6A2O95222 327 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 ECDO95905 644 aaPredicted RBP11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 IQGAP3Q86VI3 1631 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 GLRA2P23416 452 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 COMMD7Q86VX2 200 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 CCDC36Q8IYA8 594 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 GAL3ST3Q96A11 431 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 FERD3LQ96RJ6 166 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 SH2D3AQ9BRG2 576 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 SLITRK2Q9H156 845 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 C12orf65Q9H3J6 166 aaKnown RBP11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 COMMD9Q9P000 198 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 ABCA6Q8N139 1617 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 ARHGEF17Q96PE2 2063 aaPredicted RBP11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 MED12Q93074 2177 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 USP17L10C9JJH3 530 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 M0R036 132 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 GJB6O95452 261 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 PPP2R1BP30154 601 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 PTPN5P54829 565 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 ZNF45Q02386 682 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 ADGRE1Q14246 886 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 AHSA2Q719I0 299 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 CDK20Q8IZL9 346 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 STARD8Q92502 1023 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 CAB39LQ9H9S4 337 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 EXTL3O43909 919 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 FGRP09769 529 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 PSKH1P11801 424 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 TTC39CQ8N584 583 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 QTRT2Q9H974 415 aaKnown RBP11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 LRG1P02750 347 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 TGM3Q08188 693 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 BST1Q10588 318 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 HAGHLQ6PII5 290 aaPredicted RBP11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 CLIP3Q96DZ5 547 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 NPAS2Q99743 824 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 CIB1Q99828 191 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 CDH19Q9H159 772 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms