RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 CCNI2Q6ZMN8 369 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ERN2Q76MJ5 926 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1A-202ENST00000366159 SLFN11Q7Z7L1 901 aa13.94□□□□□ -0.18
TNFRSF1A-202ENST00000366159 PYROXD2Q8N2H3 581 aa13.94□□□□□ -0.18
TNFRSF1A-202ENST00000366159 TBC1D31Q96DN5 1066 aa13.94□□□□□ -0.18
TNFRSF1A-202ENST00000366159 VCPIP1Q96JH7 1222 aa13.94□□□□□ -0.18
TNFRSF1A-202ENST00000366159 NAT10Q9H0A0 1025 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1A-202ENST00000366159 GDF3Q9NR23 364 aa13.94□□□□□ -0.18
TNFRSF1A-202ENST00000366159 TAS2R14Q9NYV8 317 aa13.94□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ZFR2Q9UPR6 939 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1A-202ENST00000366159 A0A1B0GTH6 734 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 WASH4PA8MWX3 477 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 PRAMEF26H0Y7S4 382 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 KPNA3O00505 521 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 RNGTTO60942 597 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 CCDC172P0C7W6 258 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ETFBP38117 255 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 AIF1P55008 147 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 OGDHQ02218 1023 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 CCDC15Q0P6D6 951 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 IQCB1Q15051 598 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 SETMARQ53H47 684 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 SLC45A4Q5BKX6 768 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 SFMBT2Q5VUG0 894 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 RWDD4Q6NW29 188 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 TMPRSS7Q7RTY8 843 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 HORMAD1Q86X24 394 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 GATAD2AQ86YP4 633 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 NAP1L5Q96NT1 182 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 HEPHQ9BQS7 1158 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 CNPY3Q9BT09 278 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 TTYH3Q9C0H2 523 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 AIPL1Q9NZN9 384 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 DNAI1Q9UI46 699 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 FZD10Q9ULW2 581 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 FCF1Q9Y324 198 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ITPR1Q14643 2758 aa13.93□□□□□ -0.18
TNFRSF1A-202ENST00000366159 A0A1W2PQC6 194 aa13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 A0A1W2PQU0 124 aa13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 LRRC53A6NM62 1247 aa13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 SMTNL1A8MU46 457 aa13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 TAF4O00268 1085 aa13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 YKT6O15498 198 aa13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 KDELR3O43731 214 aa13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ITGB7P26010 798 aa13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 EPHA8P29322 1005 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 CCNHP51946 323 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 BNIP3Q12983 259 aa13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 MAMLD1Q13495 774 aa13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 E4F1Q66K89 784 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 PLEKHA7Q6IQ23 1121 aa13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 DNAJC24Q6P3W2 148 aa13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ARFGAP1Q8N6T3 406 aa13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 RTL3Q8N8U3 475 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 GRIN3AQ8TCU5 1115 aa13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 MCEEQ96PE7 176 aa13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 SEPT11Q9NVA2 429 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 CA5BQ9Y2D0 317 aa13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 NBEAQ8NFP9 2946 aa13.92□□□□□ -0.18
TNFRSF1A-202ENST00000366159 AP1G1O43747 822 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 MAGEC1O60732 1142 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 RAMP2O60895 175 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 GSRP00390 522 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ADRB3P13945 408 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 TNFAIP3P21580 790 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 PRKCIP41743 596 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 RECQLP46063 649 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ARRB1P49407 418 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ZNF165P49910 485 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 NEK3P51956 506 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 FGL2Q14314 439 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 STAT4Q14765 748 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 NR1I3Q14994 352 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 POLD3Q15054 466 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 SMAD1Q15797 465 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 CAVIN1Q6NZI2 390 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ZNF571Q7Z3V5 609 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 UMODL1-AS1Q8N2C9 162 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 OXR1Q8N573 874 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 OR2AP1Q8NGE2 309 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 TSC1Q92574 1164 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 PPP1R16AQ96I34 528 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 LRIG1Q96JA1 1093 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 KLC2Q9H0B6 622 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 GPR27Q9NS67 375 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 FADS3Q9Y5Q0 445 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 PKD1L2Q7Z442 2459 aa13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ARID1BQ8NFD5 2236 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ANKRD11Q6UB99 2663 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-202ENST00000366159 SRRM3A6NNA2 597 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 SLC31A1O15431 190 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 SPINT1O43278 529 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ITGAVP06756 1048 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 GZMAP12544 262 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 PRLRP16471 622 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 EPHB2P29323 1055 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 GKP32189 559 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 GEMIN4P57678 1058 aaKnown RBP13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 YBEYP58557 167 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 CAMK2BQ13554 666 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms