RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 FAM47DPA6NHR8 397 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 ARHGAP42A6NI28 874 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 J3KR12 359 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 CDX4O14627 284 aaPredicted RBP17.21■□□□□ 0.35
CKLF-204ENST00000362093 SLC30A4O14863 429 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 LEFTY1O75610 366 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 TMCC1O94876 653 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 FSBPO95073 299 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 GSRP00390 522 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 IGHV4-34P06331 123 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 GNSP15586 552 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 MAN1A1P33908 653 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 ARHGAP25P42331 645 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 SSR1P43307 286 aaKnown RBP17.21■□□□□ 0.35
CKLF-204ENST00000362093 PAPOLAP51003 745 aaKnown RBP17.21■□□□□ 0.35
CKLF-204ENST00000362093 CCNHP51946 323 aaPredicted RBP17.21■□□□□ 0.35
CKLF-204ENST00000362093 CYTH1Q15438 398 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 POM121L1PQ3SYA9 428 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 ATP13A4Q4VNC1 1196 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 AGBL4Q5VU57 503 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 RHOT2Q8IXI1 618 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 LZTR1Q8N653 840 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 OR14C36Q8NHC7 312 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 RFFLQ8WZ73 363 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 ARRDC3Q96B67 414 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 EDEM2Q9BV94 578 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 TM6SF2Q9BZW4 377 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 KDM4CQ9H3R0 1056 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 MFHAS1Q9Y4C4 1052 aa17.21■□□□□ 0.35
CKLF-204ENST00000362093 NYNRINQ9P2P1 1898 aaKnown RBP17.2■□□□□ 0.34
CKLF-204ENST00000362093 A0A1B0GTW7 788 aa17.2■□□□□ 0.34
CKLF-204ENST00000362093 LRRC72A6NJI9 287 aa17.2■□□□□ 0.34
CKLF-204ENST00000362093 BCAT2O15382 392 aaPredicted RBP17.2■□□□□ 0.34
CKLF-204ENST00000362093 PLRG1O43660 514 aaKnown RBP17.2■□□□□ 0.34
CKLF-204ENST00000362093 PRAMEF11O60813 436 aa17.2■□□□□ 0.34
CKLF-204ENST00000362093 CFIP05156 583 aa17.2■□□□□ 0.34
CKLF-204ENST00000362093 MAGEA1P43355 309 aa17.2■□□□□ 0.34
CKLF-204ENST00000362093 CDH6P55285 790 aa17.2■□□□□ 0.34
CKLF-204ENST00000362093 SNRPD1P62314 119 aaKnown RBP17.2■□□□□ 0.34
CKLF-204ENST00000362093 PUM1Q14671 1186 aaKnown RBP eCLIP17.2■□□□□ 0.34
CKLF-204ENST00000362093 MESDQ14696 234 aa17.2■□□□□ 0.34
CKLF-204ENST00000362093 MYLK3Q32MK0 819 aa17.2■□□□□ 0.34
CKLF-204ENST00000362093 STPG1Q5TH74 334 aa17.2■□□□□ 0.34
CKLF-204ENST00000362093 TP53INP2Q8IXH6 220 aa17.2■□□□□ 0.34
CKLF-204ENST00000362093 NETO2Q8NC67 525 aa17.2■□□□□ 0.34
CKLF-204ENST00000362093 OR2AP1Q8NGE2 309 aa17.2■□□□□ 0.34
CKLF-204ENST00000362093 RTKNQ9BST9 563 aa17.2■□□□□ 0.34
CKLF-204ENST00000362093 HDAC8Q9BY41 377 aa17.2■□□□□ 0.34
CKLF-204ENST00000362093 FSCN3Q9NQT6 498 aa17.2■□□□□ 0.34
CKLF-204ENST00000362093 ETNK2Q9NVF9 386 aa17.2■□□□□ 0.34
CKLF-204ENST00000362093 RCOR3Q9P2K3 495 aaPredicted RBP17.2■□□□□ 0.34
CKLF-204ENST00000362093 CDV3Q9UKY7 258 aaKnown RBP17.2■□□□□ 0.34
CKLF-204ENST00000362093 PCDHA13Q9Y5I0 950 aa17.2■□□□□ 0.34
CKLF-204ENST00000362093 ZNF292O60281 2723 aa17.2■□□□□ 0.34
CKLF-204ENST00000362093 TBC1D3DA0A087WVF3 549 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 TBC1D3IA0A087WXS9 549 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 TBC1D3EA0A087X179 549 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 TBC1D3KA0A087X1G2 549 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 A0A1W2PPC4 97 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 TBC1D3FA6NER0 549 aaPredicted RBP17.19■□□□□ 0.34
CKLF-204ENST00000362093 TBC1D3LB9A6J9 549 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 KPNA3O00505 521 aaPredicted RBP17.19■□□□□ 0.34
CKLF-204ENST00000362093 TM4SF5O14894 197 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 POP4O95707 220 aaKnown RBP17.19■□□□□ 0.34
CKLF-204ENST00000362093 KRT7P08729 469 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 CD48P09326 243 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 TBC1D3HP0C7X1 549 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 CD27P26842 260 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 CDC25BP30305 580 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 CCR5P51681 352 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 TAS2R38P59533 333 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 CCDC15Q0P6D6 951 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 MMRN1Q13201 1228 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 PIP5KL1Q5T9C9 394 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 TBC1D3GQ6DHY5 549 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 TBC1D3CQ6IPX1 549 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 TBC1D3Q8IZP1 549 aaPredicted RBP17.19■□□□□ 0.34
CKLF-204ENST00000362093 GRIN3AQ8TCU5 1115 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 LRIG1Q96JA1 1093 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 MIR1-1HGQ9H1L0 117 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 EBF2Q9HAK2 575 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 UBA2Q9UBT2 640 aaPredicted RBP17.19■□□□□ 0.34
CKLF-204ENST00000362093 EPN1Q9Y6I3 576 aaPredicted RBP17.19■□□□□ 0.34
CKLF-204ENST00000362093 SLCO1B1Q9Y6L6 691 aa17.19■□□□□ 0.34
CKLF-204ENST00000362093 PI4KAP42356 2102 aa17.18■□□□□ 0.34
CKLF-204ENST00000362093 TMEM110-MUSTN1A8MSY1 372 aa17.18■□□□□ 0.34
CKLF-204ENST00000362093 ARHGAP33O14559 1287 aa17.18■□□□□ 0.34
CKLF-204ENST00000362093 ENGP17813 658 aa17.18■□□□□ 0.34
CKLF-204ENST00000362093 GKP32189 559 aa17.18■□□□□ 0.34
CKLF-204ENST00000362093 CYLC1P35663 651 aaPredicted RBP17.18■□□□□ 0.34
CKLF-204ENST00000362093 DPYSL3Q14195 570 aa17.18■□□□□ 0.34
CKLF-204ENST00000362093 KRT81Q14533 505 aa17.18■□□□□ 0.34
CKLF-204ENST00000362093 PDK2Q15119 407 aa17.18■□□□□ 0.34
CKLF-204ENST00000362093 ATXN7L2Q5T6C5 722 aaPredicted RBP17.18■□□□□ 0.34
CKLF-204ENST00000362093 TMCO3Q6UWJ1 677 aa17.18■□□□□ 0.34
CKLF-204ENST00000362093 ARHGAP36Q6ZRI8 547 aa17.18■□□□□ 0.34
CKLF-204ENST00000362093 ERN2Q76MJ5 926 aaKnown RBP17.18■□□□□ 0.34
CKLF-204ENST00000362093 TMTC1Q8IUR5 882 aa17.18■□□□□ 0.34
CKLF-204ENST00000362093 ZCCHC9Q8N567 271 aaKnown RBP17.18■□□□□ 0.34
CKLF-204ENST00000362093 KCTD6Q8NC69 237 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms