RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 RIMS3Q9UJD0 308 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 NUDT5Q9UKK9 219 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 PSMD13Q9UNM6 376 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 PIN4Q9Y237 131 aaKnown RBP10.74□□□□□ -0.69
SMC3-201ENST00000361804 TDRD15B5MCY1 1934 aaKnown RBP10.74□□□□□ -0.69
SMC3-201ENST00000361804 TTC24A2A3L6 582 aaPredicted RBP10.74□□□□□ -0.69
SMC3-201ENST00000361804 KLHL33A6NCF5 533 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 VAPBO95292 243 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 GLUD2P49448 558 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 YBX1P67809 324 aaKnown RBP10.74□□□□□ -0.69
SMC3-201ENST00000361804 DGKDQ16760 1214 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 PIGGQ5H8A4 983 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 TSTD2Q5T7W7 516 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 TMEM135Q86UB9 458 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 SIK2Q9H0K1 926 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 GIMAP2Q9UG22 337 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 AP2A1O95782 977 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 CLPTM1O96005 669 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 NCAM1P13591 858 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 RPL14P50914 215 aaKnown RBP10.74□□□□□ -0.69
SMC3-201ENST00000361804 TPI1P60174 286 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 POU5F1BQ06416 359 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 CCDC153Q494R4 210 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 PAN2Q504Q3 1202 aaKnown RBP10.74□□□□□ -0.69
SMC3-201ENST00000361804 FSCBQ5H9T9 825 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 SPANXN3Q5MJ09 141 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 PRAMEF19Q5SWL8 479 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 STXBP5Q5T5C0 1151 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 CST9Q5W186 159 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 ESRP1Q6NXG1 681 aaKnown RBP10.74□□□□□ -0.69
SMC3-201ENST00000361804 ARHGAP22Q7Z5H3 698 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 LDB1Q86U70 411 aaPredicted RBP10.74□□□□□ -0.69
SMC3-201ENST00000361804 B3GALNT2Q8NCR0 500 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 JADE3Q92613 823 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 PRICKLE1Q96MT3 831 aaPredicted RBP10.74□□□□□ -0.69
SMC3-201ENST00000361804 C1QTNF1Q9BXJ1 281 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 DDIT4Q9NX09 232 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 GTSE1Q9NYZ3 720 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 H3BSA7 217 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 PLOD2O00469 737 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 HDAC3O15379 428 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 MAGEA12P43365 314 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 CBLBQ13191 982 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 GRB14Q14449 540 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 ZNF484Q5JVG2 852 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 SH2D4BQ5SQS7 431 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 CNSTQ6PJW8 725 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 CLEC20AQ6ZU45 233 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 APLFQ8IW19 511 aaPredicted RBP10.73□□□□□ -0.69
SMC3-201ENST00000361804 CNTD1Q8N815 330 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 BEST2Q8NFU1 509 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 IPMKQ8NFU5 416 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 PPTC7Q8NI37 304 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 WNT8BQ93098 351 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 HAPLN3Q96S86 360 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 NPY6RQ99463 290 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 ANKRD12Q6UB98 2062 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 TRANK1O15050 2925 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 C7orf72A4D263 438 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 RGSL1A5PLK6 1076 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 XPO1O14980 1071 aaKnown RBP10.73□□□□□ -0.69
SMC3-201ENST00000361804 USP46P62068 366 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 ARHGAP17Q68EM7 881 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 STRADAQ7RTN6 431 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 APPL2Q8NEU8 664 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 HMGCLL1Q8TB92 370 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 NCSTNQ92542 709 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 BRD8Q9H0E9 1235 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 OSBPL2Q9H1P3 480 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 LRRC4Q9HBW1 653 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 PREBQ9HCU5 417 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 CHST12Q9NRB3 414 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 IRAK4Q9NWZ3 460 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 HSFX1Q9UBD0 423 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 SFMBT1Q9UHJ3 866 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 DFFAO00273 331 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 CASQ2O14958 399 aaPredicted RBP10.73□□□□□ -0.69
SMC3-201ENST00000361804 UGT1A6P19224 532 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 CYP2B6P20813 491 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 ADRA1BP35368 520 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 CDH15P55291 814 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 ART3Q13508 389 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 ADGRE1Q14246 886 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 INSCQ1MX18 579 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 RWDD4Q6NW29 188 aaKnown RBP10.73□□□□□ -0.69
SMC3-201ENST00000361804 CYS1Q717R9 158 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 BNIPLQ7Z465 357 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 ZC3HC1Q86WB0 502 aaKnown RBP10.73□□□□□ -0.69
SMC3-201ENST00000361804 EGFL6Q8IUX8 553 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 CPNE9Q8IYJ1 553 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 SIX6OS1Q8N1H7 587 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 TXNDC5Q8NBS9 432 aaKnown RBP10.73□□□□□ -0.69
SMC3-201ENST00000361804 LRTOMTQ8WZ04 291 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 STN1Q9H668 368 aaKnown RBP10.73□□□□□ -0.69
SMC3-201ENST00000361804 CCDC167Q9P0B6 97 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 TLK1Q9UKI8 766 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 PTGDR2Q9Y5Y4 395 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 CROCCQ5TZA2 2017 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 TCAF2A6NFQ2 919 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 HACD1B0YJ81 288 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms