RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 BTN2A3PQ96KV6 586 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 SMC6Q96SB8 1091 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 ZYG11BQ9C0D3 744 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 ZNF334Q9HCZ1 680 aaPredicted RBP12.85□□□□□ -0.35
GGPS1-202ENST00000358966 CHRAC1Q9NRG0 131 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 FGFR1OP2Q9NVK5 253 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 RBM22Q9NW64 420 aaKnown RBP eCLIP12.85□□□□□ -0.35
GGPS1-202ENST00000358966 AFF4Q9UHB7 1163 aaKnown RBP12.85□□□□□ -0.35
GGPS1-202ENST00000358966 SLC24A2Q9UI40 661 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 IKBKGQ9Y6K9 419 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 HMX2A2RU54 273 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 TRIM49D1C9J1S8 452 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 HGSO14964 777 aaPredicted RBP12.85□□□□□ -0.35
GGPS1-202ENST00000358966 NCAM2O15394 837 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 FGF10O15520 208 aaPredicted RBP12.85□□□□□ -0.35
GGPS1-202ENST00000358966 ABLIM3O94929 683 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 ALOX15P16050 662 aaPredicted RBP12.85□□□□□ -0.35
GGPS1-202ENST00000358966 GLDCP23378 1020 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 FOXN2P32314 431 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 KCTD11Q693B1 232 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 CDHR3Q6ZTQ4 885 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 LRRC6Q86X45 466 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 GSDMBQ8TAX9 411 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 SPG21Q9NZD8 308 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 DLGAP2Q9P1A6 1054 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 BACE2Q9Y5Z0 518 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 FAM47DPA6NHR8 397 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 SDR42E2A6NKP2 422 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 CCT8L1PA6NM43 557 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 A8MUI8 341 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 FGF18O76093 207 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 IGLV3-27P01718 113 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 ADRA1DP25100 572 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 OR1E1P30953 314 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 STX2P32856 288 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 ATP5C1P36542 298 aaKnown RBP12.84□□□□□ -0.35
GGPS1-202ENST00000358966 KCNJ2P63252 427 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 ITKQ08881 620 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 POU6F1Q14863 301 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 CCDC92Q53HC0 331 aaPredicted RBP12.84□□□□□ -0.35
GGPS1-202ENST00000358966 FAM133BQ5BKY9 247 aaKnown RBP12.84□□□□□ -0.35
GGPS1-202ENST00000358966 STXBP5Q5T5C0 1151 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 CPLX4Q7Z7G2 160 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 TMEM150AQ86TG1 271 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 ZNF669Q96BR6 464 aaPredicted RBP12.84□□□□□ -0.35
GGPS1-202ENST00000358966 CHMP6Q96FZ7 201 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 NT5MQ9NPB1 228 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 UTP6Q9NYH9 597 aaKnown RBP12.84□□□□□ -0.35
GGPS1-202ENST00000358966 GGT7Q9UJ14 662 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 TMCO1Q9UM00 188 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 PCDHA11Q9Y5I1 949 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 hCG_2014768A0A024R1R8 64 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 CNPP09543 421 aaKnown RBP12.84□□□□□ -0.35
GGPS1-202ENST00000358966 DRD4P21917 467 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 ALDH1A3P47895 512 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 TUFMP49411 452 aaKnown RBP12.84□□□□□ -0.35
GGPS1-202ENST00000358966 CCNG1P51959 295 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 TSNAXIP1Q2TAA8 658 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 FOXB2Q5VYV0 432 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 TXNDC8Q6A555 127 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 DNAJB7Q7Z6W7 309 aaPredicted RBP12.84□□□□□ -0.35
GGPS1-202ENST00000358966 LONP2Q86WA8 852 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 RNF135Q8IUD6 432 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 RIBC1Q8N443 379 aaPredicted RBP12.84□□□□□ -0.35
GGPS1-202ENST00000358966 ATP6V0D2Q8N8Y2 350 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 AGAP2Q99490 1192 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 ZBED2Q9BTP6 218 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 TTLL2Q9BWV7 592 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 SLCO1B3Q9NPD5 702 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 ZNF212Q9UDV6 495 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 PAIP2BQ9ULR5 123 aaKnown RBP12.84□□□□□ -0.35
GGPS1-202ENST00000358966 SLC12A4Q9UP95 1085 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 GMEB1Q9Y692 573 aa12.84□□□□□ -0.35
GGPS1-202ENST00000358966 CFAP73A6NFT4 308 aa12.83□□□□□ -0.35
GGPS1-202ENST00000358966 KIAA0355O15063 1070 aa12.83□□□□□ -0.35
GGPS1-202ENST00000358966 TYROBPO43914 113 aa12.83□□□□□ -0.35
GGPS1-202ENST00000358966 PEX11BO96011 259 aa12.83□□□□□ -0.35
GGPS1-202ENST00000358966 LINC00271P0C7V0 271 aa12.83□□□□□ -0.35
GGPS1-202ENST00000358966 TACR2P21452 398 aa12.83□□□□□ -0.35
GGPS1-202ENST00000358966 CYP4F8P98187 520 aa12.83□□□□□ -0.35
GGPS1-202ENST00000358966 TMEM199Q8N511 208 aa12.83□□□□□ -0.35
GGPS1-202ENST00000358966 ZBTB8BQ8NAP8 495 aaPredicted RBP12.83□□□□□ -0.35
GGPS1-202ENST00000358966 OR7D4Q8NG98 312 aa12.83□□□□□ -0.35
GGPS1-202ENST00000358966 TCP10LQ8TDR4 215 aa12.83□□□□□ -0.35
GGPS1-202ENST00000358966 PRICKLE1Q96MT3 831 aaPredicted RBP12.83□□□□□ -0.35
GGPS1-202ENST00000358966 FICDQ9BVA6 458 aa12.83□□□□□ -0.35
GGPS1-202ENST00000358966 SLC13A1Q9BZW2 595 aa12.83□□□□□ -0.35
GGPS1-202ENST00000358966 NKIRAS1Q9NYS0 192 aa12.83□□□□□ -0.35
GGPS1-202ENST00000358966 DNMT3LQ9UJW3 386 aa12.83□□□□□ -0.35
GGPS1-202ENST00000358966 ZFP37Q9Y6Q3 630 aaPredicted RBP12.83□□□□□ -0.35
GGPS1-202ENST00000358966 PLXNA4Q9HCM2 1894 aa12.83□□□□□ -0.36
GGPS1-202ENST00000358966 MATN3O15232 486 aa12.83□□□□□ -0.36
GGPS1-202ENST00000358966 SLC2A3P11169 496 aa12.83□□□□□ -0.36
GGPS1-202ENST00000358966 PRKCHP24723 683 aa12.83□□□□□ -0.36
GGPS1-202ENST00000358966 CCNCP24863 283 aa12.83□□□□□ -0.36
GGPS1-202ENST00000358966 CORO1AP31146 461 aaKnown RBP12.83□□□□□ -0.36
GGPS1-202ENST00000358966 DSC2Q02487 901 aa12.83□□□□□ -0.36
GGPS1-202ENST00000358966 DNAJC3Q13217 504 aa12.83□□□□□ -0.36
GGPS1-202ENST00000358966 HECTD3Q5T447 861 aa12.83□□□□□ -0.36
GGPS1-202ENST00000358966 C4orf22Q6V702 233 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms