RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 FNIP1Q8TF40 1166 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 MAGED4Q96JG8 741 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 MRPL57Q9BQC6 102 aaKnown RBP13.88□□□□□ -0.19
VCP-201ENST00000358901 ACSS2Q9NR19 701 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 KRT84Q9NSB2 600 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 ZNF112Q9UJU3 913 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 FGF10O15520 208 aaPredicted RBP13.87□□□□□ -0.19
VCP-201ENST00000358901 FARP2O94887 1054 aaPredicted RBP13.87□□□□□ -0.19
VCP-201ENST00000358901 SOX6P35712 828 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 AAGABQ6PD74 315 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 LCLAT1Q6UWP7 414 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 FAM228AQ86W67 206 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 PCSK9Q8NBP7 692 aaKnown RBP13.87□□□□□ -0.19
VCP-201ENST00000358901 PAWRQ96IZ0 340 aaKnown RBP13.87□□□□□ -0.19
VCP-201ENST00000358901 MTG1Q9BT17 334 aaPredicted RBP13.87□□□□□ -0.19
VCP-201ENST00000358901 KLQ9UEF7 1012 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 LGALS13Q9UHV8 139 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 DAPK2Q9UIK4 370 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 AP4B1Q9Y6B7 739 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 CLUHO75153 1309 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 NRCAMQ92823 1304 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 FAM20BO75063 409 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 VPS4BO75351 444 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 WFS1O76024 890 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 IMPDH2P12268 514 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 HADHBP55084 474 aaKnown RBP13.87□□□□□ -0.19
VCP-201ENST00000358901 MRPS5P82675 430 aaKnown RBP13.87□□□□□ -0.19
VCP-201ENST00000358901 FOLH1Q04609 750 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 RAP1GAP2Q684P5 730 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 FAM45BPQ6NSW5 357 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 ZNF621Q6ZSS3 439 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 TSHZ1Q6ZSZ6 1077 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 SH3BP5LQ7L8J4 393 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 HPS6Q86YV9 775 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 SEMA3CQ99985 751 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 PDGFDQ9GZP0 370 aaPredicted RBP13.87□□□□□ -0.19
VCP-201ENST00000358901 INVSQ9Y283 1065 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 BTRCQ9Y297 605 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 MYO5BQ9ULV0 1848 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 SMIM31A0A1B0GVY4 71 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 TTLL13PA6NNM8 815 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 NELFEP18615 380 aaKnown RBP13.87□□□□□ -0.19
VCP-201ENST00000358901 NR1H2P55055 460 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 KLF10Q13118 480 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 FSCN1Q16658 493 aaKnown RBP13.87□□□□□ -0.19
VCP-201ENST00000358901 PIGWQ7Z7B1 504 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 ZBTB46Q86UZ6 589 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 LRRC52Q8N7C0 313 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 TFAP2BQ92481 460 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 TPD52L3Q96J77 140 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 EMILIN2Q9BXX0 1053 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 ZDHHC18Q9NUE0 388 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 OPTCQ9UBM4 332 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 SLIT3O75094 1523 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 M0R2N6 131 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 AHCYL1O43865 530 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 RPLP2P05387 115 aaKnown RBP13.87□□□□□ -0.19
VCP-201ENST00000358901 SQLEQ14534 574 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 PTPRNQ16849 979 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 OR8H2Q8N162 312 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 PQLC1Q8N2U9 271 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 MPP6Q9NZW5 540 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 PADI4Q9UM07 663 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 CHKBQ9Y259 395 aa13.87□□□□□ -0.19
VCP-201ENST00000358901 IGKV6D-41A0A0C4DH26 115 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 MTA2O94776 668 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 CRHR1P34998 444 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 RFX3P48380 749 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 SLC35G1Q2M3R5 365 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 PPM1JQ5JR12 505 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 PRAMEF19Q5SWL8 479 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 HOMEZQ8IX15 550 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 KBTBD2Q8IY47 623 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 SYTL1Q8IYJ3 562 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 ZNF276Q8N554 614 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 C1orf127Q8N9H9 656 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 PTCD3Q96EY7 689 aaKnown RBP13.86□□□□□ -0.19
VCP-201ENST00000358901 TINF2Q9BSI4 451 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 CDH19Q9H159 772 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 NXF3Q9H4D5 531 aaKnown RBP13.86□□□□□ -0.19
VCP-201ENST00000358901 APOBEC3GQ9HC16 384 aaKnown RBP13.86□□□□□ -0.19
VCP-201ENST00000358901 MIEF1Q9NQG6 463 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 C6orf203Q9P0P8 240 aaPredicted RBP13.86□□□□□ -0.19
VCP-201ENST00000358901 KANSL3Q9P2N6 904 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 EGFL7Q9UHF1 273 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 CAPN8A6NHC0 703 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 SCAMP3O14828 347 aaKnown RBP13.86□□□□□ -0.19
VCP-201ENST00000358901 MGRN1O60291 552 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 KPNA6O60684 536 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 CILPO75339 1184 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 TM7SF2O76062 418 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 MPSTP25325 297 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 ADSSP30520 456 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 ADRA1BP35368 520 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 SLC7A2P52569 658 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 TP53BP2Q13625 1128 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 CXCL17Q6UXB2 119 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 DAW1Q8N136 415 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 HDAC10Q969S8 669 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 LENG9Q96B70 501 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms