RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 SLC30A1Q9Y6M5 507 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 NRAPQ86VF7 1730 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 ITM2AO43736 263 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 RAMP2O60895 175 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 OR1E1P30953 314 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 CD52P31358 61 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 SEMA5AQ13591 1074 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 INPP5AQ14642 412 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 SGO1Q5FBB7 561 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 ARHGAP17Q68EM7 881 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 ARFGAP1Q8N6T3 406 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 SH3TC2Q8TF17 1288 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 CYGBQ8WWM9 190 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 CCDC126Q96EE4 140 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 FCRL2Q96LA5 508 aaPredicted RBP12.42□□□□□ -0.42
COL20A1-201ENST00000358894 MTG1Q9BT17 334 aaPredicted RBP12.42□□□□□ -0.42
COL20A1-201ENST00000358894 MAF1Q9H063 256 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 PIF1Q9H611 641 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 WDR41Q9HAD4 459 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 USP29Q9HBJ7 922 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 TBC1D13Q9NVG8 400 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 FBXO5Q9UKT4 447 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 GLP2RO95838 553 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 XPAP23025 273 aaPredicted RBP12.42□□□□□ -0.42
COL20A1-201ENST00000358894 EDNRBP24530 442 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 CD86P42081 329 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 PITX1P78337 314 aaPredicted RBP12.42□□□□□ -0.42
COL20A1-201ENST00000358894 FASTKQ14296 549 aaKnown RBP12.42□□□□□ -0.42
COL20A1-201ENST00000358894 GRM3Q14832 879 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 FAM117BQ6P1L5 589 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 ZNF781Q8N8C0 355 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 GPR152Q8TDT2 470 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 KLHL5Q96PQ7 755 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 PAIP1Q9H074 479 aaKnown RBP12.42□□□□□ -0.42
COL20A1-201ENST00000358894 ALG9Q9H6U8 611 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 PIGVQ9NUD9 493 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 STX18Q9P2W9 335 aaKnown RBP12.42□□□□□ -0.42
COL20A1-201ENST00000358894 ADAM28Q9UKQ2 775 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 DSEQ9UL01 958 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 FZD10Q9ULW2 581 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 RNF112Q9ULX5 631 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 STX7O15400 261 aaKnown RBP12.41□□□□□ -0.42
COL20A1-201ENST00000358894 PEX1O43933 1283 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 TBX10O75333 385 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 OR4Q2P0C623 313 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 MYL4P12829 197 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 PTPN3P26045 913 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 CRABP2P29373 138 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 HMOX2P30519 316 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 PPARGP37231 505 aaPredicted RBP12.41□□□□□ -0.42
COL20A1-201ENST00000358894 USP46P62068 366 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 INCA1Q0VD86 236 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 GALNTL6Q49A17 601 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 DHDDSQ86SQ9 333 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 UCMAQ8WVF2 138 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 ASIC4Q96FT7 647 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 GLT1D1Q96MS3 346 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 PRPF18Q99633 342 aaKnown RBP12.41□□□□□ -0.42
COL20A1-201ENST00000358894 HNRNPABQ99729 332 aaKnown RBP12.41□□□□□ -0.42
COL20A1-201ENST00000358894 CINPQ9BW66 212 aaPredicted RBP12.41□□□□□ -0.42
COL20A1-201ENST00000358894 SEMA6AQ9H2E6 1030 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 RCOR3Q9P2K3 495 aaPredicted RBP12.41□□□□□ -0.42
COL20A1-201ENST00000358894 PRKAG3Q9UGI9 489 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 HEATR9A2RTY3 570 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 AP2A1O95782 977 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 GJA8P48165 433 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 MAPK10P53779 464 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 MRPS6P82932 125 aaKnown RBP12.41□□□□□ -0.42
COL20A1-201ENST00000358894 MAP2K5Q13163 448 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 LZTR1Q8N653 840 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 BHLHE22Q8NFJ8 381 aaPredicted RBP12.41□□□□□ -0.42
COL20A1-201ENST00000358894 PRR11Q96HE9 360 aaPredicted RBP12.41□□□□□ -0.42
COL20A1-201ENST00000358894 SIGLEC10Q96LC7 697 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 APOL5Q9BWW9 433 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 CDH19Q9H159 772 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 R3HDMLQ9H3Y0 253 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 ENTPD7Q9NQZ7 604 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 SATB2Q9UPW6 733 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 PSAT1Q9Y617 370 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 ATP5BP06576 529 aaKnown RBP12.41□□□□□ -0.42
COL20A1-201ENST00000358894 HARS2P49590 506 aaKnown RBP12.41□□□□□ -0.42
COL20A1-201ENST00000358894 SLC18A2Q05940 514 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 KLF10Q13118 480 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 ZNF460Q14592 562 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 NFE2Q16621 373 aaPredicted RBP12.41□□□□□ -0.42
COL20A1-201ENST00000358894 NRBF2Q96F24 287 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 ZNF570Q96NI8 536 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 SERPINB11Q96P15 392 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 RHOBTB2Q9BYZ6 727 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 EBF2Q9HAK2 575 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 RAP2CQ9Y3L5 183 aa12.41□□□□□ -0.42
COL20A1-201ENST00000358894 F5H5T6 163 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 DPYSL4O14531 572 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 SCAMP3O14828 347 aaKnown RBP12.4□□□□□ -0.42
COL20A1-201ENST00000358894 LSM1O15116 133 aaKnown RBP12.4□□□□□ -0.42
COL20A1-201ENST00000358894 BAIAP3O94812 1187 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 FGFR3P22607 806 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 NMBRP28336 390 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 GALK1P51570 392 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 KCNK10P57789 538 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms