RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 ZNF195O14628 629 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 PPEF2O14830 753 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 TRIM13O60858 407 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 PIGNO95427 931 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 PRKCGP05129 697 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 C2P06681 752 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 PTPN2P17706 415 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 MZF1P28698 734 aaPredicted RBP8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 RCVRNP35243 200 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 PRAMEP78395 509 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 NIPAL4Q0D2K0 466 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 KCNJ8Q15842 424 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 SOWAHAQ2M3V2 549 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 SLC10A6Q3KNW5 377 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 GJC2Q5T442 439 aaPredicted RBP8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 EGFLAMQ63HQ2 1017 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 NCBP2-AS2Q69YL0 99 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 OGFOD2Q6N063 350 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 METTL7BQ6UX53 244 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 CYP2R1Q6VVX0 501 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 TIFABQ6ZNK6 161 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 MICALL2Q8IY33 904 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 TRPC4APQ8TEL6 797 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 CHPT1Q8WUD6 406 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 PPP1R13LQ8WUF5 828 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 NLRP7Q8WX94 980 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 ARNTL2Q8WYA1 636 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 FCRL3Q96P31 734 aaPredicted RBP8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 TBCBQ99426 244 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 OMDQ99983 421 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 RTKNQ9BST9 563 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 SLC4A5Q9BY07 1137 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 TRPV6Q9H1D0 765 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 CCDC68Q9H2F9 335 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 PRDM12Q9H4Q4 367 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 STN1Q9H668 368 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 WDR41Q9HAD4 459 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 CLK4Q9HAZ1 481 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 IARS2Q9NSE4 1012 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 STK39Q9UEW8 545 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 TLK1Q9UKI8 766 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 PCDHB12Q9Y5F1 795 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 TMEM233B4DJY2 109 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 AQP9O43315 295 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 KRT75O95678 551 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 JUNP05412 331 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 NAT2P11245 290 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 SPRP35270 261 aaPredicted RBP8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 RBP5P82980 135 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 ZNF460Q14592 562 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 ARL13AQ5H913 290 aaPredicted RBP8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 CERCAMQ5T4B2 595 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 OGFRL1Q5TC84 451 aaPredicted RBP8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 KRT80Q6KB66 452 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 EPGNQ6UW88 154 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 C16orf89Q6UX73 402 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 KDELC2Q7Z4H8 507 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 FBXO16Q8IX29 292 aaPredicted RBP8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 MAELQ96JY0 434 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 QKIQ96PU8 341 aaKnown RBP eCLIP8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 PCDHAC1Q9H158 963 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 CXCL16Q9H2A7 254 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 R3HDMLQ9H3Y0 253 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 C6orf203Q9P0P8 240 aaPredicted RBP8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 RAB26Q9ULW5 256 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 RGSL1A5PLK6 1076 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 MDM4O15151 490 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 FBXO21O94952 628 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 MYL4P12829 197 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 SOX11P35716 441 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 GRIA4P48058 902 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 RPS3AP61247 264 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 PITX1P78337 314 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 CDKL1Q00532 357 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 MBTD1Q05BQ5 628 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 CDK18Q07002 472 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 CEACAM7Q14002 265 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 RGS21Q2M5E4 152 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 DCAF15Q66K64 600 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 RNF135Q8IUD6 432 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 LRRC49Q8IUZ0 686 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 LILRA2Q8N149 483 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 URGCPQ8TCY9 931 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 SLC16A10Q8TF71 515 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 PDCD6IPQ8WUM4 868 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 ATP6V1E2Q96A05 226 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 FAM167AQ96KS9 214 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 CCDC138Q96M89 665 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 CTRCQ99895 268 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 DCUN1D5Q9BTE7 237 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 VPS33BQ9H267 617 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 FZD8Q9H461 694 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 RETREG1Q9H6L5 497 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 CYP3A43Q9HB55 503 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 PTPRHQ9HD43 1115 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 CHRAC1Q9NRG0 131 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 BFARQ9NZS9 450 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 MORF4L1Q9UBU8 362 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 VPS51Q9UID3 782 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 PADI4Q9UM07 663 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms