RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 EDEM1Q92611 657 aa17.94■□□□□ 0.46
GYPC-202ENST00000356887 TSNARE1Q96NA8 513 aa17.94■□□□□ 0.46
GYPC-202ENST00000356887 VTI1BQ9UEU0 232 aa17.94■□□□□ 0.46
GYPC-202ENST00000356887 ZDHHC2Q9UIJ5 367 aa17.94■□□□□ 0.46
GYPC-202ENST00000356887 TBC1D30Q9Y2I9 924 aa17.94■□□□□ 0.46
GYPC-202ENST00000356887 CCL15-CCL14A0A0B4J2E2 113 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 NEMP1O14524 444 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 DDHD2O94830 711 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 AHSGP02765 367 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 COL6A2P12110 1019 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 EPHA3P29320 983 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 NUDT2P50583 147 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 PGGT1BP53609 377 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 NAGLUP54802 743 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 ROR2Q01974 943 aaKnown RBP17.93■□□□□ 0.46
GYPC-202ENST00000356887 SLC12A1Q13621 1099 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 CCL15Q16663 113 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 PPM1LQ5SGD2 360 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 OGFRL1Q5TC84 451 aaPredicted RBP17.93■□□□□ 0.46
GYPC-202ENST00000356887 SPRYD7Q5W111 196 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 TWF2Q6IBS0 349 aaKnown RBP17.93■□□□□ 0.46
GYPC-202ENST00000356887 PKN3Q6P5Z2 889 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 DCLRE1AQ6PJP8 1040 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 PLEKHH3Q7Z736 793 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 MFN1Q8IWA4 741 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 LSMEM2Q8N112 164 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 KYQ8NBH2 561 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 KCTD4Q8WVF5 259 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 CELF6Q96J87 481 aaKnown RBP17.93■□□□□ 0.46
GYPC-202ENST00000356887 SCYL1Q96KG9 808 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 VPS28Q9UK41 221 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 PTCH2Q9Y6C5 1203 aa17.93■□□□□ 0.46
GYPC-202ENST00000356887 TRIP12Q14669 1992 aaPredicted RBP17.93■□□□□ 0.46
GYPC-202ENST00000356887 SAT1P21673 171 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 ADSLP30566 484 aaPredicted RBP17.92■□□□□ 0.46
GYPC-202ENST00000356887 ZNF33AQ06730 810 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 GRM2Q14416 872 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 PCID2Q5JVF3 399 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 MAP3K21Q5TCX8 1036 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 TMC7Q7Z402 723 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 SLC41A1Q8IVJ1 513 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 DSELQ8IZU8 1212 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 CENPLQ8N0S6 344 aaPredicted RBP17.92■□□□□ 0.46
GYPC-202ENST00000356887 BRI3BPQ8WY22 251 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 SERPINI1Q99574 410 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 GPBP1L1Q9HC44 474 aaPredicted RBP17.92■□□□□ 0.46
GYPC-202ENST00000356887 PSMD13Q9UNM6 376 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 TIMM13Q9Y5L4 95 aaPredicted RBP17.92■□□□□ 0.46
GYPC-202ENST00000356887 CCDC78A2IDD5 438 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 SLCO1B7G3V0H7 640 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 RTN3O95197 1032 aaPredicted RBP17.92■□□□□ 0.46
GYPC-202ENST00000356887 AVPR1AP37288 418 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 GLRBP48167 497 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 CD151P48509 253 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 POLD2P49005 469 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 COG7P83436 770 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 NSUN2Q08J23 767 aaKnown RBP eCLIP17.92■□□□□ 0.46
GYPC-202ENST00000356887 DLG1Q12959 904 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 CYLC2Q14093 348 aaPredicted RBP17.92■□□□□ 0.46
GYPC-202ENST00000356887 SETD3Q86TU7 594 aaPredicted RBP17.92■□□□□ 0.46
GYPC-202ENST00000356887 CNTN4Q8IWV2 1026 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 RBM12BQ8IXT5 1001 aaKnown RBP17.92■□□□□ 0.46
GYPC-202ENST00000356887 ARHGAP18Q8N392 663 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 FSTL5Q8N475 847 aaPredicted RBP17.92■□□□□ 0.46
GYPC-202ENST00000356887 USP33Q8TEY7 942 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 PPP1R36Q96LQ0 422 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 GPR78Q96P69 363 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 BTBD9Q96Q07 612 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 NUF2Q9BZD4 464 aa17.92■□□□□ 0.46
GYPC-202ENST00000356887 C6orf203Q9P0P8 240 aaPredicted RBP17.92■□□□□ 0.46
GYPC-202ENST00000356887 G3BP2Q9UN86 482 aaKnown RBP17.92■□□□□ 0.46
GYPC-202ENST00000356887 MEIS3P2A8K0S8 358 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 DLX3O60479 287 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 PPARGP37231 505 aaPredicted RBP17.91■□□□□ 0.46
GYPC-202ENST00000356887 POLE2P56282 527 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 PPP2R5DQ14738 602 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 HERC3Q15034 1050 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 ZNF423Q2M1K9 1284 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 LRRC8EQ6NSJ5 796 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 ST13P4Q8IZP2 240 aaPredicted RBP17.91■□□□□ 0.46
GYPC-202ENST00000356887 SPATA22Q8NHS9 363 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 OSBPL2Q9H1P3 480 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 PACSIN3Q9UKS6 424 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 CDH9Q9ULB4 789 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 ACOT9Q9Y305 439 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 AAR2Q9Y312 384 aaKnown RBP17.91■□□□□ 0.46
GYPC-202ENST00000356887 FNDC1Q4ZHG4 1894 aaPredicted RBP17.91■□□□□ 0.46
GYPC-202ENST00000356887 PGK1P00558 417 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 SRGAP2BP0DMP2 458 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 CCNCP24863 283 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 ALDH1A3P47895 512 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 UGP2Q16851 508 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 MMEL1Q495T6 779 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 LIN52Q52LA3 116 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 PIGGQ5H8A4 983 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 ARHGAP36Q6ZRI8 547 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 SDCCAG8Q86SQ7 713 aaPredicted RBP17.91■□□□□ 0.46
GYPC-202ENST00000356887 TAC4Q86UU9 113 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 MFSD6LQ8IWD5 586 aa17.91■□□□□ 0.46
GYPC-202ENST00000356887 PQLC1Q8N2U9 271 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms