RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 TPRG1LQ5T0D9 272 aa16.19■□□□□ 0.18
PDGFA-201ENST00000354513 NAA35Q5VZE5 725 aa16.19■□□□□ 0.18
PDGFA-201ENST00000354513 ZNF783Q6ZMS7 281 aa16.19■□□□□ 0.18
PDGFA-201ENST00000354513 FAM114A1Q8IWE2 563 aa16.19■□□□□ 0.18
PDGFA-201ENST00000354513 SNIP1Q8TAD8 396 aaKnown RBP16.19■□□□□ 0.18
PDGFA-201ENST00000354513 CPA5Q8WXQ8 436 aa16.19■□□□□ 0.18
PDGFA-201ENST00000354513 CCDC114Q96M63 670 aa16.19■□□□□ 0.18
PDGFA-201ENST00000354513 CALN1Q9BXU9 219 aa16.19■□□□□ 0.18
PDGFA-201ENST00000354513 ZYG11BQ9C0D3 744 aa16.19■□□□□ 0.18
PDGFA-201ENST00000354513 CEP44Q9C0F1 390 aa16.19■□□□□ 0.18
PDGFA-201ENST00000354513 FCF1Q9Y324 198 aaKnown RBP16.19■□□□□ 0.18
PDGFA-201ENST00000354513 PCDHB1Q9Y5F3 818 aa16.19■□□□□ 0.18
PDGFA-201ENST00000354513 FADS3Q9Y5Q0 445 aa16.19■□□□□ 0.18
PDGFA-201ENST00000354513 PTPRQQ9UMZ3 2332 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 POM121BA6NF01 834 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 FAM72CH0Y354 149 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 FFAR2O15552 330 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 BRINP1O60477 761 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 GJB6O95452 261 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 ITGB7P26010 798 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 ERCC5P28715 1186 aaPredicted RBP16.18■□□□□ 0.18
PDGFA-201ENST00000354513 GKP32189 559 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 ABCG1P45844 678 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 CCNHP51946 323 aaPredicted RBP16.18■□□□□ 0.18
PDGFA-201ENST00000354513 NEK3P51956 506 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 FMO1Q01740 532 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 C15orf59Q2T9L4 293 aaPredicted RBP16.18■□□□□ 0.18
PDGFA-201ENST00000354513 FAM72AQ5TYM5 149 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 CDCP2Q5VXM1 449 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 FAM72DQ6L9T8 149 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 LRRC31Q6UY01 552 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 ARCQ7LC44 396 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 NLRP14Q86W24 1093 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 FAM72BQ86X60 149 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 DRC7Q8IY82 874 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 PCDH20Q8N6Y1 951 aaKnown RBP16.18■□□□□ 0.18
PDGFA-201ENST00000354513 JOSD2Q8TAC2 188 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 KLF6Q99612 283 aaPredicted RBP16.18■□□□□ 0.18
PDGFA-201ENST00000354513 SPON2Q9BUD6 331 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 PDCL3Q9H2J4 239 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 PRORYQ9H606 182 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 ATP13A1Q9HD20 1204 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 PPARGC1AQ9UBK2 798 aaKnown RBP16.18■□□□□ 0.18
PDGFA-201ENST00000354513 GGT7Q9UJ14 662 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 CLCA2Q9UQC9 943 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 FARP1Q9Y4F1 1045 aaPredicted RBP16.18■□□□□ 0.18
PDGFA-201ENST00000354513 RAI2Q9Y5P3 530 aa16.18■□□□□ 0.18
PDGFA-201ENST00000354513 ATMQ13315 3056 aa16.17■□□□□ 0.18
PDGFA-201ENST00000354513 KALRNO60229 2985 aa16.17■□□□□ 0.18
PDGFA-201ENST00000354513 ASXL3Q9C0F0 2248 aa16.17■□□□□ 0.18
PDGFA-201ENST00000354513 EPHB6O15197 1021 aa16.17■□□□□ 0.18
PDGFA-201ENST00000354513 PCDH8O95206 1070 aa16.17■□□□□ 0.18
PDGFA-201ENST00000354513 CYP1A1P04798 512 aaPredicted RBP16.17■□□□□ 0.18
PDGFA-201ENST00000354513 AKT2P31751 481 aa16.17■□□□□ 0.18
PDGFA-201ENST00000354513 L1CAMP32004 1257 aa16.17■□□□□ 0.18
PDGFA-201ENST00000354513 ATP11AP98196 1134 aa16.17■□□□□ 0.18
PDGFA-201ENST00000354513 NRG1Q02297 640 aaPredicted RBP16.17■□□□□ 0.18
PDGFA-201ENST00000354513 PTP4A2Q12974 167 aa16.17■□□□□ 0.18
PDGFA-201ENST00000354513 FZD2Q14332 565 aa16.17■□□□□ 0.18
PDGFA-201ENST00000354513 KIF26BQ2KJY2 2108 aa16.17■□□□□ 0.18
PDGFA-201ENST00000354513 ZNF542PQ5EBM4 170 aa16.17■□□□□ 0.18
PDGFA-201ENST00000354513 CARD16Q5EG05 197 aa16.17■□□□□ 0.18
PDGFA-201ENST00000354513 KYAT3Q6YP21 454 aaKnown RBP16.17■□□□□ 0.18
PDGFA-201ENST00000354513 STK33Q9BYT3 514 aa16.17■□□□□ 0.18
PDGFA-201ENST00000354513 DYRK4Q9NR20 520 aa16.17■□□□□ 0.18
PDGFA-201ENST00000354513 TAB2Q9NYJ8 693 aa16.17■□□□□ 0.18
PDGFA-201ENST00000354513 KLF15Q9UIH9 416 aa16.17■□□□□ 0.18
PDGFA-201ENST00000354513 ITM2BQ9Y287 266 aa16.17■□□□□ 0.18
PDGFA-201ENST00000354513 PAXBP1Q9Y5B6 917 aa16.17■□□□□ 0.18
PDGFA-201ENST00000354513 A6NNZ2 444 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 AP1G1O43747 822 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 NEBLO76041 1014 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 CKMT1AP12532 417 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 JAM2P57087 298 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 C1QBPQ07021 282 aaKnown RBP16.16■□□□□ 0.18
PDGFA-201ENST00000354513 CCDC14Q49A88 953 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 TCP11X2Q5H9J9 407 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 ACBD5Q5T8D3 534 aaPredicted RBP16.16■□□□□ 0.18
PDGFA-201ENST00000354513 KIAA1161Q6NSJ0 714 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 RETSATQ6NUM9 610 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 Q6ZSR6 202 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 TMC6Q7Z403 805 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 PTAR1Q7Z6K3 402 aaPredicted RBP16.16■□□□□ 0.18
PDGFA-201ENST00000354513 PHLDB2Q86SQ0 1253 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 CCDC185Q8N715 623 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 OR6K2Q8NGY2 324 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 ARHGEF2Q92974 986 aaKnown RBP16.16■□□□□ 0.18
PDGFA-201ENST00000354513 APOLD1Q96LR9 279 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 HEPHQ9BQS7 1158 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 SLC17A9Q9BYT1 436 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 TM6SF2Q9BZW4 377 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 PNMA8BQ9ULN7 279 aaPredicted RBP16.16■□□□□ 0.18
PDGFA-201ENST00000354513 HS3ST3A1Q9Y663 406 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 AK5Q9Y6K8 562 aa16.16■□□□□ 0.18
PDGFA-201ENST00000354513 MGAQ8IWI9 3026 aa16.15■□□□□ 0.18
PDGFA-201ENST00000354513 SCN8AQ9UQD0 1980 aa16.15■□□□□ 0.18
PDGFA-201ENST00000354513 RP1P56715 2156 aa16.15■□□□□ 0.18
PDGFA-201ENST00000354513 C2CD4BA6NLJ0 364 aa16.15■□□□□ 0.18
PDGFA-201ENST00000354513 C1QL1O75973 258 aa16.15■□□□□ 0.18
PDGFA-201ENST00000354513 GFPT2O94808 682 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms