RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 PIM1P11309 404 aaPredicted RBP12.3□□□□□ -0.44
DDX4-201ENST00000353507 STMN1P16949 149 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 XRCC1P18887 633 aaPredicted RBP12.3□□□□□ -0.44
DDX4-201ENST00000353507 LRPAP1P30533 357 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 ADSLP30566 484 aaPredicted RBP12.3□□□□□ -0.44
DDX4-201ENST00000353507 POU6F1Q14863 301 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 IQSEC1Q6DN90 963 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 RWDD4Q6NW29 188 aaKnown RBP12.3□□□□□ -0.44
DDX4-201ENST00000353507 IPMKQ8NFU5 416 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 PGAP3Q96FM1 320 aaPredicted RBP12.3□□□□□ -0.44
DDX4-201ENST00000353507 SENP8Q96LD8 212 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 ZFP42Q96MM3 310 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 TBL1YQ9BQ87 522 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 TINF2Q9BSI4 451 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 FAM95CA0A1B0GW59 222 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 MBLAC1A4D2B0 266 aaPredicted RBP12.3□□□□□ -0.44
DDX4-201ENST00000353507 GABRDO14764 452 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
DDX4-201ENST00000353507 SBK3P0C264 359 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 PABPC4LP0CB38 370 aaKnown RBP12.3□□□□□ -0.44
DDX4-201ENST00000353507 COL6A2P12110 1019 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 RAB10P61026 200 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 MPP1Q00013 466 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 ADGRE1Q14246 886 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 ZNF460Q14592 562 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 HERC3Q15034 1050 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 PIGGQ5H8A4 983 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 PCID2Q5JVF3 399 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 UGT2A3Q6UWM9 527 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 CENPLQ8N0S6 344 aaPredicted RBP12.3□□□□□ -0.44
DDX4-201ENST00000353507 CPSF7Q8N684 471 aaKnown RBP12.3□□□□□ -0.44
DDX4-201ENST00000353507 RNF148Q8N7C7 305 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 SMG8Q8ND04 991 aaKnown RBP12.3□□□□□ -0.44
DDX4-201ENST00000353507 PPHLN1Q8NEY8 458 aaKnown RBP12.3□□□□□ -0.44
DDX4-201ENST00000353507 BHLHE22Q8NFJ8 381 aaPredicted RBP12.3□□□□□ -0.44
DDX4-201ENST00000353507 TMA16Q96EY4 203 aaKnown RBP12.3□□□□□ -0.44
DDX4-201ENST00000353507 PCED1BQ96HM7 432 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 EFCAB1Q9HAE3 211 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 CACNG4Q9UBN1 327 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 SLC4A7Q9Y6M7 1214 aa12.3□□□□□ -0.44
DDX4-201ENST00000353507 PTGESO14684 152 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 VAPBO95292 243 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 AHSGP02765 367 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 ME2P23368 584 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 PMLP29590 882 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 MSX2P35548 267 aaPredicted RBP12.29□□□□□ -0.44
DDX4-201ENST00000353507 KPNA2P52292 529 aaKnown RBP12.29□□□□□ -0.44
DDX4-201ENST00000353507 ATXN3P54252 364 aaPredicted RBP12.29□□□□□ -0.44
DDX4-201ENST00000353507 CTBP1Q13363 440 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 MFSD10Q14728 455 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 ZNF423Q2M1K9 1284 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 PKN3Q6P5Z2 889 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 GPR142Q7Z601 462 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 DENND6AQ8IWF6 608 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 ATPAF2Q8N5M1 289 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 SPATA22Q8NHS9 363 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 DLG3Q92796 817 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 UNKQ9C0B0 810 aaKnown RBP12.29□□□□□ -0.44
DDX4-201ENST00000353507 COPS7BQ9H9Q2 264 aaPredicted RBP12.29□□□□□ -0.44
DDX4-201ENST00000353507 ZBTB26Q9HCK0 441 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 GTSE1Q9NYZ3 720 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 VPS28Q9UK41 221 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 TIMM13Q9Y5L4 95 aaPredicted RBP12.29□□□□□ -0.44
DDX4-201ENST00000353507 COMMD3-BMI1R4GMX3 469 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 MYBPHLA2RUH7 354 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 DLX3O60479 287 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 TADA2AO75478 443 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 ETS2P15036 469 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 GRIA2P42262 883 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 LHX1P48742 406 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 SLC12A2P55011 1212 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 SH3BGRP55822 239 aaPredicted RBP12.29□□□□□ -0.44
DDX4-201ENST00000353507 NSUN2Q08J23 767 aaKnown RBP eCLIP12.29□□□□□ -0.44
DDX4-201ENST00000353507 TMEM151AQ8N4L1 468 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 ZMIZ2Q8NF64 920 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 NAT14Q8WUY8 206 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 SLC10A4Q96EP9 437 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 ELMO2Q96JJ3 720 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
DDX4-201ENST00000353507 NCKIPSDQ9NZQ3 722 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 TBC1D30Q9Y2I9 924 aa12.29□□□□□ -0.44
DDX4-201ENST00000353507 SMIM31A0A1B0GVY4 71 aa12.28□□□□□ -0.44
DDX4-201ENST00000353507 TRPC5OSA6NMA1 111 aa12.28□□□□□ -0.44
DDX4-201ENST00000353507 TREHO43280 583 aa12.28□□□□□ -0.44
DDX4-201ENST00000353507 ANXA9O76027 345 aa12.28□□□□□ -0.44
DDX4-201ENST00000353507 MT-CYBP00156 380 aaPredicted RBP12.28□□□□□ -0.44
DDX4-201ENST00000353507 JUNP05412 331 aaKnown RBP12.28□□□□□ -0.44
DDX4-201ENST00000353507 FAM163BP0C2L3 166 aa12.28□□□□□ -0.44
DDX4-201ENST00000353507 CXCR3P49682 368 aa12.28□□□□□ -0.44
DDX4-201ENST00000353507 CSRP3P50461 194 aa12.28□□□□□ -0.44
DDX4-201ENST00000353507 CEACAM7Q14002 265 aa12.28□□□□□ -0.44
DDX4-201ENST00000353507 TLR1Q15399 786 aa12.28□□□□□ -0.44
DDX4-201ENST00000353507 SH2D4BQ5SQS7 431 aa12.28□□□□□ -0.44
DDX4-201ENST00000353507 DCLRE1AQ6PJP8 1040 aa12.28□□□□□ -0.44
DDX4-201ENST00000353507 TAC4Q86UU9 113 aa12.28□□□□□ -0.44
DDX4-201ENST00000353507 SATL1Q86VE3 508 aa12.28□□□□□ -0.44
DDX4-201ENST00000353507 SPATA6LQ8N4H0 392 aa12.28□□□□□ -0.44
DDX4-201ENST00000353507 MARVELD2Q8N4S9 558 aa12.28□□□□□ -0.44
DDX4-201ENST00000353507 CNTD1Q8N815 330 aa12.28□□□□□ -0.44
DDX4-201ENST00000353507 STON2Q8WXE9 905 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms