RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 UBA6A0AVT1 1052 aaPredicted RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 DDX3YO15523 660 aaKnown RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 PAPSS1O43252 624 aaPredicted RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 FAM189A1O60320 539 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 DFNA5O60443 496 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 STX11O75558 287 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 OAS1P00973 400 aaKnown RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 PDGFRAP16234 1089 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 EIF6P56537 245 aaKnown RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 CYP4F2P78329 520 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 MVKQ03426 396 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 CYP4F3Q08477 520 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 GTF2H3Q13889 308 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 FXNQ16595 210 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 NFIL3Q16649 462 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 IDO2Q6ZQW0 420 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 DGLUCYQ7Z3D6 616 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 C12orf50Q8NA57 414 aaPredicted RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 SMG8Q8ND04 991 aaKnown RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 SLC22A8Q8TCC7 542 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 DDX17Q92841 729 aaKnown RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 FAM136AQ96C01 138 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 ULK4Q96C45 1275 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 Q96MT0 163 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 GBA3Q9H227 469 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 GMPPBQ9Y5P6 360 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 TAF6LQ9Y6J9 622 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 NRKQ7Z2Y5 1582 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 KNTC1P50748 2209 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 EFCAB9A8MZ26 197 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 H3BNH8 94 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 ITGAVP06756 1048 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 C8BP07358 591 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 CLCA4Q14CN2 919 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 SLC1A5Q15758 541 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 CDO1Q16878 200 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 CCDC58Q4VC31 144 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 ZNF773Q6PK81 442 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 TMPRSS11AQ6ZMR5 421 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 DPY19L3Q6ZPD9 716 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 NLGN1Q8N2Q7 840 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 ELMOD1Q8N336 334 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 RCN3Q96D15 328 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 CYP4F12Q9HCS2 524 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 TRPM5Q9NZQ8 1165 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 MED11Q9P086 117 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 SLC39A10Q9ULF5 831 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 SSR3Q9UNL2 185 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 RAP2CQ9Y3L5 183 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 A0A1W2PPW3 197 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 ANKRD34BA5PLL1 514 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 KBTBD13C9JR72 458 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 CYP27B1O15528 508 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 KLHL18O94889 574 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 MYL12AP19105 171 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 FOXN2P32314 431 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 E2F2Q14209 437 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 INTS11Q5TA45 600 aaKnown RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 ADGRD1Q6QNK2 874 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 FRMD6Q96NE9 622 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 CDK5RAP1Q96SZ6 601 aaKnown RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 TLE6Q9H808 572 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 TMEM8AQ9HCN3 771 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 H2AFY2Q9P0M6 372 aaPredicted RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 CCNL1Q9UK58 526 aaPredicted RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 MRPS7Q9Y2R9 242 aaKnown RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 HSPB11Q9Y547 144 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 SLIT1O75093 1534 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 FAM205CA6NFA0 338 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 KLF11O14901 512 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 CYP19A1P11511 503 aaPredicted RBP5.09□□□□□ -1.6
SKP1-202ENST00000353411 CD40LGP29965 261 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 CRHR1P34998 444 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 SLC18A2Q05940 514 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 MGAT5Q09328 741 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 ELP6Q0PNE2 266 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 HNRNPDQ14103 355 aaKnown RBP5.09□□□□□ -1.6
SKP1-202ENST00000353411 TBRG1Q3YBR2 411 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 CACHD1Q5VU97 1274 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 TYW3Q6IPR3 259 aaKnown RBP5.09□□□□□ -1.6
SKP1-202ENST00000353411 DNAJA4Q8WW22 397 aaPredicted RBP5.09□□□□□ -1.6
SKP1-202ENST00000353411 ASB9Q96DX5 294 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 RIBC2Q9H4K1 309 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 DHX35Q9H5Z1 703 aaKnown RBP5.09□□□□□ -1.6
SKP1-202ENST00000353411 PCDHGB4Q9UN71 923 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 MAGED2Q9UNF1 606 aaPredicted RBP5.09□□□□□ -1.6
SKP1-202ENST00000353411 USP6P35125 1406 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 SVILO95425 2214 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 MDM4O15151 490 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 CHADO15335 359 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 TGM6O95932 706 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 BPGMP07738 259 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 MATN1P21941 496 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 MLLT3P42568 568 aaPredicted RBP5.09□□□□□ -1.6
SKP1-202ENST00000353411 SRP54P61011 504 aaKnown RBP5.09□□□□□ -1.6
SKP1-202ENST00000353411 KLF10Q13118 480 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 ZYG11AQ6WRX3 759 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 LINC00523Q86TU6 105 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 TIGD4Q8IY51 512 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 CHCHD6Q9BRQ6 235 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms