RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 EPHA3P29320 983 aa16.19■□□□□ 0.18
PTPN11-201ENST00000351677 DDR2Q16832 855 aa16.19■□□□□ 0.18
PTPN11-201ENST00000351677 TM6SF2Q9BZW4 377 aa16.19■□□□□ 0.18
PTPN11-201ENST00000351677 UXTQ9UBK9 157 aaPredicted RBP16.19■□□□□ 0.18
PTPN11-201ENST00000351677 DARSP14868 501 aaKnown RBP16.19■□□□□ 0.18
PTPN11-201ENST00000351677 CAPZA2P47755 286 aa16.19■□□□□ 0.18
PTPN11-201ENST00000351677 ARHGAP17Q68EM7 881 aa16.19■□□□□ 0.18
PTPN11-201ENST00000351677 DHRSXQ8N5I4 330 aa16.19■□□□□ 0.18
PTPN11-201ENST00000351677 NKX2-3Q8TAU0 364 aa16.19■□□□□ 0.18
PTPN11-201ENST00000351677 C9orf16Q9BUW7 83 aa16.19■□□□□ 0.18
PTPN11-201ENST00000351677 LHX5Q9H2C1 402 aa16.19■□□□□ 0.18
PTPN11-201ENST00000351677 DUSP12Q9UNI6 340 aa16.19■□□□□ 0.18
PTPN11-201ENST00000351677 ZBTB14O43829 449 aa16.19■□□□□ 0.18
PTPN11-201ENST00000351677 HNRNPLP14866 589 aaKnown RBP eCLIP16.19■□□□□ 0.185e-16■■■■■ 27.4
PTPN11-201ENST00000351677 CLK2P49760 499 aaKnown RBP16.19■□□□□ 0.18
PTPN11-201ENST00000351677 CLCN5P51795 746 aa16.19■□□□□ 0.18
PTPN11-201ENST00000351677 RD3Q7Z3Z2 195 aa16.19■□□□□ 0.18
PTPN11-201ENST00000351677 SYT12Q8IV01 421 aa16.19■□□□□ 0.18
PTPN11-201ENST00000351677 FBXO30Q8TB52 745 aa16.19■□□□□ 0.18
PTPN11-201ENST00000351677 TTYH3Q9C0H2 523 aa16.19■□□□□ 0.18
PTPN11-201ENST00000351677 ZNF862O60290 1169 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 HOXB8P17481 243 aaPredicted RBP16.18■□□□□ 0.18
PTPN11-201ENST00000351677 GRIA3P42263 894 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 GALNT3Q14435 633 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 SLC44A4Q53GD3 710 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 PACS1Q6VY07 963 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 MON1BQ7L1V2 547 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 FAM35AQ86V20 835 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 ACMSDQ8TDX5 336 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 ASB8Q9H765 288 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 DNMT3LQ9UJW3 386 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 SORCS3Q9UPU3 1222 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 CRYBB1P53674 252 aaPredicted RBP16.18■□□□□ 0.18
PTPN11-201ENST00000351677 KRT78Q8N1N4 520 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 OR52K2Q8NGK3 314 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 MLPHQ9BV36 600 aaPredicted RBP16.18■□□□□ 0.18
PTPN11-201ENST00000351677 PHACTR1Q9C0D0 580 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 KRCC1Q9NPI7 259 aaPredicted RBP16.18■□□□□ 0.18
PTPN11-201ENST00000351677 PNPOQ9NVS9 261 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 XPR1Q9UBH6 696 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 TSC22D4Q9Y3Q8 395 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 AFDNP55196 1824 aaKnown RBP16.18■□□□□ 0.18
PTPN11-201ENST00000351677 PDZK1P1A8MUH7 402 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 DGKAP23743 735 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 ILF2Q12905 390 aaKnown RBP16.18■□□□□ 0.18
PTPN11-201ENST00000351677 SH3BP5LQ7L8J4 393 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 STK40Q8N2I9 435 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 LRRC52Q8N7C0 313 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 GRIN3AQ8TCU5 1115 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 ZNF398Q8TD17 642 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 NFKBIZQ9BYH8 718 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 HMX1Q9NP08 348 aaPredicted RBP16.18■□□□□ 0.18
PTPN11-201ENST00000351677 SNRPB2P08579 225 aaKnown RBP16.18■□□□□ 0.18
PTPN11-201ENST00000351677 SERPINA4P29622 427 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 BRCC3P46736 316 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 GABRB2P47870 512 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 HSPA14Q0VDF9 509 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 TTC27Q6P3X3 843 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 LRRC57Q8N9N7 239 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 MIEF2Q96C03 454 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 UROC1Q96N76 676 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 GRIP2Q9C0E4 1043 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 IGLV3-22A0A075B6J6 115 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 SLC15A5A6NIM6 579 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 EDF1O60869 148 aaKnown RBP16.18■□□□□ 0.18
PTPN11-201ENST00000351677 NOMO1Q15155 1222 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 CCDC92Q53HC0 331 aaPredicted RBP16.18■□□□□ 0.18
PTPN11-201ENST00000351677 FNBP1LQ5T0N5 605 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 HECTD3Q5T447 861 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 CERCAMQ5T4B2 595 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 MTSS1LQ765P7 747 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 TSEN34Q9BSV6 310 aaKnown RBP16.18■□□□□ 0.18
PTPN11-201ENST00000351677 AHSPQ9NZD4 102 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 KLHL20Q9Y2M5 609 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 IPPQ9Y573 584 aa16.18■□□□□ 0.18
PTPN11-201ENST00000351677 FFAR3O14843 346 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 GPR42O15529 346 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 HOXC6P09630 235 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 USP4Q13107 963 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 NCF4Q15080 339 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 TRAF7Q6Q0C0 670 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 ZDHHC13Q8IUH4 622 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 DNAJB14Q8TBM8 379 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 EPS8L2Q9H6S3 715 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 MYPNQ86TC9 1320 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 ATP6AP2A0A1C7CYW4 349 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 B4GALT4O60513 344 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 ATP6AP2O75787 350 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 BCL10O95999 233 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 GPR15P49685 360 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 NOMO2Q5JPE7 1267 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 TMPRSS4Q9NRS4 437 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 C1orf232A0A0U1RR37 186 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 C2orf71A6NGG8 1288 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 SERPINI2O75830 405 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 MAP2K5Q13163 448 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 SQLEQ14534 574 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 USP45Q70EL2 814 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 TTC7BQ86TV6 843 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 OR8H2Q8N162 312 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms