RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 LIMD1Q9UGP4 676 aa18.82■□□□□ 0.6
UBE3C-201ENST00000348165 CARNS1A5YM72 827 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 RPN2P04844 631 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 CTPS1P17812 591 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 FASP25445 335 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 ILF2Q12905 390 aaKnown RBP18.81■□□□□ 0.6
UBE3C-201ENST00000348165 MSLNQ13421 630 aaPredicted RBP18.81■□□□□ 0.6
UBE3C-201ENST00000348165 CFAP52Q8N1V2 620 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 UTP15Q8TED0 518 aaKnown RBP18.81■□□□□ 0.6
UBE3C-201ENST00000348165 C15orf41Q9Y2V0 281 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 REXO2Q9Y3B8 237 aaKnown RBP18.81■□□□□ 0.6
UBE3C-201ENST00000348165 PCDHA11Q9Y5I1 949 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 TFEBP19484 476 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 MMP8P22894 467 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 GRK4P32298 578 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 TTMPQ5BVD1 217 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 BBS4Q96RK4 519 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 MYLK2Q9H1R3 596 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 PCDH18Q9HCL0 1135 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 ADAM28Q9UKQ2 775 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 RGS5O15539 181 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 TLL1O43897 1013 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 PROCP04070 461 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 ANXA5P08758 320 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 TAF10Q12962 218 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 KCNA10Q16322 511 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 FAM98BQ52LJ0 330 aaKnown RBP18.81■□□□□ 0.6
UBE3C-201ENST00000348165 TSHZ1Q6ZSZ6 1077 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.81■□□□□ 0.6
UBE3C-201ENST00000348165 SELENOMQ8WWX9 145 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 C1QTNF7Q9BXJ2 289 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 KLHL4Q9C0H6 718 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 ARHGAP28Q9P2N2 729 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 MCM8Q9UJA3 840 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 PCDHB9Q9Y5E1 797 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 OR6C75A6NL08 312 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 S100A3P33764 101 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 ARMCX6Q7L4S7 300 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 SYT12Q8IV01 421 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 RGL4Q8IZJ4 473 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 EIF1ADQ8N9N8 165 aaKnown RBP18.81■□□□□ 0.6
UBE3C-201ENST00000348165 HJURPQ8NCD3 748 aaPredicted RBP18.81■□□□□ 0.6
UBE3C-201ENST00000348165 NMD3Q96D46 503 aaKnown RBP18.81■□□□□ 0.6
UBE3C-201ENST00000348165 EBNA1BP2Q99848 306 aaKnown RBP18.81■□□□□ 0.6
UBE3C-201ENST00000348165 TBCDQ9BTW9 1192 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 CASZ1Q86V15 1759 aa18.81■□□□□ 0.6
UBE3C-201ENST00000348165 GPR25O00155 361 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 PAPSS1O43252 624 aaPredicted RBP18.8■□□□□ 0.6
UBE3C-201ENST00000348165 RGS14O43566 566 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 WBP4O75554 376 aaKnown RBP18.8■□□□□ 0.6
UBE3C-201ENST00000348165 CYP2A13Q16696 494 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 DUPD1Q68J44 220 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 FOXR2Q6PJQ5 311 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 CXorf40AQ8TE69 158 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 TPD52L3Q96J77 140 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 H3BMM5 538 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 PAGE1O75459 146 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 TSPAN8P19075 237 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 FLT3P36888 993 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 GALNT3Q14435 633 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 VN1R5Q7Z5H4 357 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 SPATA6LQ8N4H0 392 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 NKAPQ8N5F7 415 aaKnown RBP18.8■□□□□ 0.6
UBE3C-201ENST00000348165 OR6K2Q8NGY2 324 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 P2RY11Q96G91 374 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 RNF145Q96MT1 663 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 KIF1AQ12756 1690 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 COL1A2P08123 1366 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 SNTNA6NMZ2 147 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 PAX3P23760 479 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 PPM1AP35813 382 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 GSSP48637 474 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 SLC25A52Q3SY17 297 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 SPRYD7Q5W111 196 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 RAET1GQ6H3X3 334 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 LRRC49Q8IUZ0 686 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 MAB21L3Q8N8X9 362 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 IGLV3-22A0A075B6J6 115 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 KRT20P35900 424 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 PIK3CGP48736 1102 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 KIAA1324Q6UXG2 1013 aaKnown RBP18.8■□□□□ 0.6
UBE3C-201ENST00000348165 SLC24A5Q71RS6 500 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 C1orf127Q8N9H9 656 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 ZSCAN18Q8TBC5 510 aaPredicted RBP18.8■□□□□ 0.6
UBE3C-201ENST00000348165 PIWIL2Q8TC59 973 aaKnown RBP18.8■□□□□ 0.6
UBE3C-201ENST00000348165 ZNF483Q8TF39 744 aaPredicted RBP18.8■□□□□ 0.6
UBE3C-201ENST00000348165 KCTD4Q8WVF5 259 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 CLEC4DQ8WXI8 215 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 NDEL1Q9GZM8 345 aa18.8■□□□□ 0.6
UBE3C-201ENST00000348165 DHX33Q9H6R0 707 aaKnown RBP18.8■□□□□ 0.6
UBE3C-201ENST00000348165 AGO1Q9UL18 857 aaKnown RBP18.8■□□□□ 0.6
UBE3C-201ENST00000348165 TNPO3Q9Y5L0 923 aaKnown RBP18.8■□□□□ 0.6
UBE3C-201ENST00000348165 NDUFB5O43674 189 aa18.79■□□□□ 0.6
UBE3C-201ENST00000348165 CTSEP14091 401 aa18.79■□□□□ 0.6
UBE3C-201ENST00000348165 MAPK8P45983 427 aa18.79■□□□□ 0.6
UBE3C-201ENST00000348165 CACNA2D1P54289 1103 aa18.79■□□□□ 0.6
UBE3C-201ENST00000348165 PKNOX1P55347 436 aa18.79■□□□□ 0.6
UBE3C-201ENST00000348165 CDK18Q07002 472 aa18.79■□□□□ 0.6
UBE3C-201ENST00000348165 ADRM1Q16186 407 aa18.79■□□□□ 0.6
UBE3C-201ENST00000348165 PCDH20Q8N6Y1 951 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms