RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 C18orf25Q96B23 403 aaPredicted RBP8.16□□□□□ -1.1
UBE4B-202ENST00000343090 BBS2Q9BXC9 721 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 RMND5AQ9H871 391 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 GOLGA2P5Q9HBQ8 144 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 SIX2Q9NPC8 291 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 GMEB1Q9Y692 573 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 RBM47A0AV96 593 aaKnown RBP8.16□□□□□ -1.1
UBE4B-202ENST00000343090 TOMM70O94826 608 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 C4BPAP04003 597 aaKnown RBP8.16□□□□□ -1.1
UBE4B-202ENST00000343090 PAX3P23760 479 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 YWHAQP27348 245 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 FOXN2P32314 431 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 ARPC4P59998 168 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 MAXP61244 160 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 IL5RAQ01344 420 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 TAF5Q15542 800 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 FSCN1Q16658 493 aaKnown RBP8.16□□□□□ -1.1
UBE4B-202ENST00000343090 ZFP1Q6P2D0 407 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 VSTM1Q6UX27 236 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 RNF19BQ6ZMZ0 732 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 MON1BQ7L1V2 547 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 FLCNQ8NFG4 579 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 SERPINB11Q96P15 392 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 TBCDQ9BTW9 1192 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 OSBPL6Q9BZF3 934 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 PRKD2Q9BZL6 878 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 PCDH18Q9HCL0 1135 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 TAS2R13Q9NYV9 303 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 WRAP73Q9P2S5 460 aaPredicted RBP8.16□□□□□ -1.1
UBE4B-202ENST00000343090 ZNF112Q9UJU3 913 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 TBKBP1A7MCY6 615 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 CLOCKO15516 846 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 FARP2O94887 1054 aaPredicted RBP8.16□□□□□ -1.1
UBE4B-202ENST00000343090 ALDH2P05091 517 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 SMIM10L2AP0DMW4 78 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 SMIM10L2BP0DMW5 78 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 HNRNPLP14866 589 aaKnown RBP eCLIP8.16□□□□□ -1.18e-11■■■■■ 27.8
UBE4B-202ENST00000343090 ARF4P18085 180 aaPredicted RBP8.16□□□□□ -1.1
UBE4B-202ENST00000343090 SERPINH1P50454 418 aaKnown RBP8.16□□□□□ -1.1
UBE4B-202ENST00000343090 FBXW4P57775 412 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 KLHDC10Q6PID8 442 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 ATG16L2Q8NAA4 619 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 ANKRD52Q8NB46 1076 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 NSMCE2Q96MF7 247 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 ADAM2Q99965 735 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 MTG1Q9BT17 334 aaPredicted RBP8.16□□□□□ -1.1
UBE4B-202ENST00000343090 DPY30Q9C005 99 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 IL22Q9GZX6 179 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 ATP6AP2A0A1C7CYW4 349 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 PRR5-ARHGAP8B1AHC4 643 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 RGS5O15539 181 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 ATP6AP2O75787 350 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 TM7SF2O76062 418 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 ERCC2P18074 760 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 PEX2P28328 305 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 CCT8P50990 548 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 ARHGAP8P85298 464 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 RUNX1T1Q06455 604 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 MYBPC3Q14896 1274 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 HIST2H2ACQ16777 129 aaPredicted RBP8.16□□□□□ -1.1
UBE4B-202ENST00000343090 RAP1GAP2Q684P5 730 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 ANKS6Q68DC2 871 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 SCARA3Q6AZY7 606 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 HIST2H2AA3Q6FI13 130 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 SCIMPQ6UWF3 145 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 STK32CQ86UX6 486 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 UNC93AQ86WB7 457 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 FAM126BQ8IXS8 530 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 GPC2Q8N158 579 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 C1orf50Q9BV19 199 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 NMUR2Q9GZQ4 415 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 ELOVL4Q9GZR5 314 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 NXF3Q9H4D5 531 aaKnown RBP8.16□□□□□ -1.1
UBE4B-202ENST00000343090 TUBGCP4Q9UGJ1 667 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 LIMD1Q9UGP4 676 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 TTLL13PA6NNM8 815 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 PSMD12O00232 456 aaPredicted RBP8.16□□□□□ -1.1
UBE4B-202ENST00000343090 SEC22BO75396 215 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 LYPLA2O95372 231 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 PENKP01210 267 aaPredicted RBP8.16□□□□□ -1.1
UBE4B-202ENST00000343090 HSMCR30P0CW71 290 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 PTGIRP43119 386 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 NAB1Q13506 487 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 BOP1Q14137 746 aaKnown RBP8.16□□□□□ -1.1
UBE4B-202ENST00000343090 SLC35G1Q2M3R5 365 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 PCID2Q5JVF3 399 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 C6orf183Q5T699 404 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 CXCL17Q6UXB2 119 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 XYLT1Q86Y38 959 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 MRPS31Q92665 395 aaKnown RBP8.16□□□□□ -1.1
UBE4B-202ENST00000343090 SHISA4Q96DD7 197 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 MED8Q96G25 268 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 ZNF670Q9BS34 389 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 HGH1Q9BTY7 390 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 FBXO44Q9H4M3 255 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 SNX15Q9NRS6 342 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 MGAT4DA6NG13 374 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 MAGEC1O60732 1142 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 CAPN1P07384 714 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 AXLP30530 894 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms