RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 DNTTP04053 509 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 SERPINE1P05121 402 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 RGS6P49758 472 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 ARPC4P59998 168 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 OVGP1Q12889 678 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 IL27RAQ6UWB1 636 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 SLC26A11Q86WA9 606 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 OR8H1Q8NGG4 311 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 METTL6Q8TCB7 284 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 GIPC3Q8TF64 312 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 RFKQ969G6 155 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 BORCS5Q969J3 196 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 TELO2Q9Y4R8 837 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 OR2AT4A6NND4 320 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 CYP27B1O15528 508 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 SQLEQ14534 574 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 LYPLAL1Q5VWZ2 237 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 WDR93Q6P2C0 686 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 CD302Q8IX05 232 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 FAM98AQ8NCA5 519 aaKnown RBP17.82■□□□□ 0.44
SMAD4-201ENST00000342988 SP140LQ9H930 580 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 ZNF638Q14966 1978 aaKnown RBP17.82■□□□□ 0.44
SMAD4-201ENST00000342988 TXNP10599 105 aaKnown RBP17.82■□□□□ 0.44
SMAD4-201ENST00000342988 NCK1P16333 377 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 RAPSNQ13702 412 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 LCN1P1Q5VSP4 162 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 FIP1L1Q6UN15 594 aaKnown RBP17.82■□□□□ 0.44
SMAD4-201ENST00000342988 RNF180Q86T96 592 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 PLEKHF1Q96S99 279 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 OGDHLQ9ULD0 1010 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 GH1P01241 217 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 PTPN5P54829 565 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 RPP38P78345 283 aaKnown RBP17.81■□□□□ 0.44
SMAD4-201ENST00000342988 GLT6D1Q7Z4J2 308 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 EIF1ADQ8N9N8 165 aaKnown RBP17.81■□□□□ 0.44
SMAD4-201ENST00000342988 NXPE2Q96DL1 559 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 CPNE2Q96FN4 548 aaPredicted RBP17.81■□□□□ 0.44
SMAD4-201ENST00000342988 HIST1H2AAQ96QV6 131 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 RTKNQ9BST9 563 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 COG5Q9UP83 839 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 KDM5CP41229 1560 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 IFNA7P01567 189 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 CD151P48509 253 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 RHOAP61586 193 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 MED22Q15528 200 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 COL26A1Q96A83 441 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 SPAG4Q9NPE6 437 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 A0A0A6YYK5 440 aaPredicted RBP17.81■□□□□ 0.44
SMAD4-201ENST00000342988 RHOCP08134 193 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 DNASE1L1P49184 302 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 SRSF11Q05519 484 aaKnown RBP17.81■□□□□ 0.44
SMAD4-201ENST00000342988 COMMD4Q9H0A8 199 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 THOP1P52888 689 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 MCEMP1Q8IX19 187 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 HGH1Q9BTY7 390 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 ATXN3LQ9H3M9 355 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 KANTRA0A1W2PQU2 76 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 RHPN2P1A8MT19 583 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 USP17L15C9J2P7 530 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 USP17L13C9JLJ4 530 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 USP17L11C9JVI0 530 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 USP17L18D6R9N7 530 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 USP17L22D6RA61 530 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 USP17L17D6RBQ6 530 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 USP17L19D6RCP7 530 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 USP17L20D6RJB6 530 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 UGT2B11O75310 529 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 NR2F1P10589 423 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 USP17L24Q0WX57 530 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 USP17L6PQ6QN14 398 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 FAM126AQ9BYI3 521 aaPredicted RBP17.81■□□□□ 0.44
SMAD4-201ENST00000342988 POMCP01189 267 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 C9P02748 559 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 NR1H2P55055 460 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 NRF1Q16656 503 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 ATXN7L2Q5T6C5 722 aaPredicted RBP17.81■□□□□ 0.44
SMAD4-201ENST00000342988 C12orf56Q8IXR9 622 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 CARD8Q9Y2G2 431 aa17.81■□□□□ 0.44
SMAD4-201ENST00000342988 CSHL1Q14406 222 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 RFTN2Q52LD8 501 aaPredicted RBP17.8■□□□□ 0.44
SMAD4-201ENST00000342988 SLC9A4Q6AI14 798 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 DSELQ8IZU8 1212 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 ART5Q96L15 291 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 A0A087WWV3 80 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 PPM1AP35813 382 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 SCN1BQ07699 218 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 RNF43Q68DV7 783 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 BHMTQ93088 406 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 PHF21BQ96EK2 531 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 DHRS1Q96LJ7 313 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 GLS2Q9UI32 602 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 UGT2B17O75795 530 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 CCNKO75909 580 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 MLYCDO95822 493 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 OGFRL1Q5TC84 451 aaPredicted RBP17.8■□□□□ 0.44
SMAD4-201ENST00000342988 PTCHD4Q6ZW05 846 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 FBXO36Q8NEA4 188 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 BHLHE22Q8NFJ8 381 aaPredicted RBP17.8■□□□□ 0.44
SMAD4-201ENST00000342988 SETD6Q8TBK2 473 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 LPAR1Q92633 364 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms