RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 PGK2P07205 417 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 TSHRP16473 764 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 PRKACBP22694 351 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 PROZP22891 400 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 CLK3P49761 638 aaKnown RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 ZNF135P52742 658 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 GALK2Q01415 458 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 CDC20Q12834 499 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 CBX2Q14781 532 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 KLHL38Q2WGJ6 581 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 CCDC14Q49A88 953 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 VWA5B1Q5TIE3 1220 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 ACAD10Q6JQN1 1059 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 SLC16A12Q6ZSM3 486 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 POLNQ7Z5Q5 900 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 ZBTB46Q86UZ6 589 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 SERINC5Q86VE9 423 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 RALGPS2Q86X27 583 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 ZNF354CQ86Y25 554 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 DCP2Q8IU60 420 aaKnown RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 SLC35B2Q8TB61 432 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 NKD2Q969F2 451 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 IL12RB2Q99665 862 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 EMILIN2Q9BXX0 1053 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 RNF38Q9H0F5 515 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 SMARCAD1Q9H4L7 1026 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 ATP13A3Q9H7F0 1226 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 RMND5AQ9H871 391 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 UBE2TQ9NPD8 197 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 TBC1D14Q9P2M4 693 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 PRPF19Q9UMS4 504 aaKnown RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 ARHGEF37A1IGU5 675 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 GOLGA8SH3BPF8 625 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 GOLGA8MH3BSY2 632 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 KPNA4O00629 521 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-202ENST00000339438 SOCS2O14508 198 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 EIF3DO15371 548 aaKnown RBP eCLIP5.67□□□□□ -1.5
CSDE1-202ENST00000339438 NBNO60934 754 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 CYP11B1P15538 503 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 RFC1P35251 1148 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-202ENST00000339438 ARCN1P48444 511 aaKnown RBP5.67□□□□□ -1.5
CSDE1-202ENST00000339438 TPTEP56180 551 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 NME3Q13232 169 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 HIF1AQ16665 826 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 ATP13A4Q4VNC1 1196 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 CEP78Q5JTW2 689 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 PLEKHA7Q6IQ23 1121 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 ALKAL1Q6UXT8 129 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 ARCQ7LC44 396 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 HEATR4Q86WZ0 1026 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 MINDY2Q8NBR6 621 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 ZSWIM2Q8NEG5 633 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 BHLHE22Q8NFJ8 381 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-202ENST00000339438 ABHD11Q8NFV4 315 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 GIMAP1Q8WWP7 306 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 SEPT11Q9NVA2 429 aaKnown RBP5.67□□□□□ -1.5
CSDE1-202ENST00000339438 THAP1Q9NVV9 213 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-202ENST00000339438 TMEM9Q9P0T7 183 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 PCDHA12Q9UN75 941 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 CCDC195A0A1B0GUA6 201 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 SHISA7A6NL88 538 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 C9IYK1 514 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 PSTPIP1O43586 416 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 LILRB3O75022 631 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 FKBP9O95302 570 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 MT-ND3P03897 115 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 KRT10P13645 584 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 UBA1P22314 1058 aaKnown RBP5.67□□□□□ -1.5
CSDE1-202ENST00000339438 LEPRP48357 1165 aaKnown RBP5.67□□□□□ -1.5
CSDE1-202ENST00000339438 TMPRSS15P98073 1019 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 ZNF252P-AS1Q0IIN9 211 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 BFSP1Q12934 665 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 NPTX1Q15818 432 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 TRIM16LQ309B1 348 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 PPM1LQ5SGD2 360 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 PMF1Q6P1K2 205 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 KCNT2Q6UVM3 1135 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 TAS1R3Q7RTX0 852 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 HAUS6Q7Z4H7 955 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 EPHX4Q8IUS5 362 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 SIX5Q8N196 739 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 BTN2A3PQ96KV6 586 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 SLITRK1Q96PX8 696 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 SLC39A3Q9BRY0 314 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 TMEM79Q9BSE2 394 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 IMPG2Q9BZV3 1241 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 DHX33Q9H6R0 707 aaKnown RBP5.67□□□□□ -1.5
CSDE1-202ENST00000339438 C12orf10Q9HB07 376 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 FANCEQ9HB96 536 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 SMOXQ9NWM0 555 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 ANAPC7Q9UJX3 599 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 FBXO9Q9UK97 447 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-202ENST00000339438 PMF1-BGLAPU3KQ54 211 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 A0A087WXM4 84 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 EPOPA6NHQ4 379 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 H0Y858 1186 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 ERVH48-1M5A8F1 160 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 ENPP3O14638 875 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 PMM2O15305 246 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms