RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 GOT1P17174 413 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 NPR3P17342 541 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 AMPD1P23109 780 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 SERPINB6P35237 376 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 GNL1P36915 607 aaPredicted RBP10.97□□□□□ -0.65
RTN3-201ENST00000338850 SULT1E1P49888 294 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 COPAP53621 1224 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 SH3BGRP55822 239 aaPredicted RBP10.97□□□□□ -0.65
RTN3-201ENST00000338850 ABCE1P61221 599 aaKnown RBP10.97□□□□□ -0.65
RTN3-201ENST00000338850 CBX2Q14781 532 aaPredicted RBP10.97□□□□□ -0.65
RTN3-201ENST00000338850 HERC3Q15034 1050 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 FSCBQ5H9T9 825 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 MROH9Q5TGP6 573 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 TWF2Q6IBS0 349 aaKnown RBP10.97□□□□□ -0.65
RTN3-201ENST00000338850 CATSPER4Q7RTX7 472 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 TMC7Q7Z402 723 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 KIRREL3Q8IZU9 778 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 TMEM86AQ8N2M4 240 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 APPL2Q8NEU8 664 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 PPP1R14CQ8TAE6 165 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 PIP4K2CQ8TBX8 421 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 ZFAND2BQ8WV99 257 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 NRG4Q8WWG1 115 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 RSPH1Q8WYR4 309 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 SUSD6Q92537 303 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 GATA6Q92908 595 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 LPPQ93052 612 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 C18orf25Q96B23 403 aaPredicted RBP10.97□□□□□ -0.65
RTN3-201ENST00000338850 ZNF778Q96MU6 729 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 SORT1Q99523 831 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 MECRQ9BV79 373 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 TRIM62Q9BVG3 475 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 ADAM33Q9BZ11 813 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 GBA3Q9H227 469 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 SNX25Q9H3E2 840 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 UGT1A7Q9HAW7 530 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 UGT1A10Q9HAW8 530 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 UGT1A8Q9HAW9 530 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 CNGB3Q9NQW8 809 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 FAM49BQ9NUQ9 324 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 NDE1Q9NXR1 346 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 SNTG2Q9NY99 539 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.97□□□□□ -0.65
RTN3-201ENST00000338850 TXNDC16Q9P2K2 825 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 TUBGCP4Q9UGJ1 667 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 SLC7A8Q9UHI5 535 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 SCOCQ9UIL1 159 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 VPS28Q9UK41 221 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 PRPF19Q9UMS4 504 aaKnown RBP10.97□□□□□ -0.65
RTN3-201ENST00000338850 PIEZO1Q92508 2521 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 WDR27A2RRH5 827 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 MEIS3P2A8K0S8 358 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 PRR5-ARHGAP8B1AHC4 643 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 NT5C1B-RDH14C9J2C7 533 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 SLCO1B7G3V0H7 640 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 H0Y3Z8 333 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 CYB561D2O14569 222 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 PPEF2O14830 753 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 CASQ2O14958 399 aaPredicted RBP10.96□□□□□ -0.65
RTN3-201ENST00000338850 ZNF623O75123 536 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 PIAS1O75925 651 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 F9P00740 461 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 ENO1P06733 434 aaKnown RBP10.96□□□□□ -0.65
RTN3-201ENST00000338850 LINGO3P0C6S8 592 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 ANPEPP15144 967 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 CALRP27797 417 aaKnown RBP10.96□□□□□ -0.65
RTN3-201ENST00000338850 SERPINB5P36952 375 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 RAB27AP51159 221 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 ARHGAP8P85298 464 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 GALNT2Q10471 571 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 IFRD2Q12894 506 aaPredicted RBP10.96□□□□□ -0.65
RTN3-201ENST00000338850 THOC5Q13769 683 aaKnown RBP10.96□□□□□ -0.65
RTN3-201ENST00000338850 ANKRD54Q6NXT1 300 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 SYCE2Q6PIF2 218 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 RIPOR1Q6ZS17 1223 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 DENND5BQ6ZUT9 1274 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 RFX8Q6ZV50 586 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 PIGZQ86VD9 579 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 RASSF3Q86WH2 238 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 DEFB106AQ8N104 65 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 ZNF567Q8N184 647 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 ARHGAP18Q8N392 663 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 TAB3Q8N5C8 712 aaPredicted RBP10.96□□□□□ -0.65
RTN3-201ENST00000338850 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.96□□□□□ -0.653e-7■■■□□ 19.1
RTN3-201ENST00000338850 B3GALNT2Q8NCR0 500 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 PTCD2Q8WV60 388 aaKnown RBP10.96□□□□□ -0.65
RTN3-201ENST00000338850 SCG3Q8WXD2 468 aaKnown RBP10.96□□□□□ -0.65
RTN3-201ENST00000338850 IRGQQ8WZA9 623 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 SPDL1Q96EA4 605 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 TSGA13Q96PP4 275 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 PANX3Q96QZ0 392 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 KCNK16Q96T55 309 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 PHF7Q9BWX1 381 aaPredicted RBP10.96□□□□□ -0.65
RTN3-201ENST00000338850 B3GNT5Q9BYG0 378 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 SLC13A1Q9BZW2 595 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 IL22Q9GZX6 179 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 S1PR5Q9H228 398 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 KRT82Q9NSB4 513 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 FAM105AQ9NUU6 356 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 BFARQ9NZS9 450 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms