RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 SLC1A5Q15758 541 aa16.49■□□□□ 0.23
HPS1-202ENST00000338546 FOXR1Q6PIV2 292 aa16.49■□□□□ 0.23
HPS1-202ENST00000338546 LVRNQ6Q4G3 990 aa16.49■□□□□ 0.23
HPS1-202ENST00000338546 CIR1Q86X95 450 aaPredicted RBP16.49■□□□□ 0.23
HPS1-202ENST00000338546 CFAP52Q8N1V2 620 aa16.49■□□□□ 0.23
HPS1-202ENST00000338546 KREMEN2Q8NCW0 462 aa16.49■□□□□ 0.23
HPS1-202ENST00000338546 GDAP1Q8TB36 358 aa16.49■□□□□ 0.23
HPS1-202ENST00000338546 ISL2Q96A47 359 aa16.49■□□□□ 0.23
HPS1-202ENST00000338546 SEC16BQ96JE7 1060 aa16.49■□□□□ 0.23
HPS1-202ENST00000338546 PRICKLE1Q96MT3 831 aaPredicted RBP16.49■□□□□ 0.23
HPS1-202ENST00000338546 APOL2Q9BQE5 337 aa16.49■□□□□ 0.23
HPS1-202ENST00000338546 LRRC3Q9BY71 257 aa16.49■□□□□ 0.23
HPS1-202ENST00000338546 ACE2Q9BYF1 805 aaPredicted RBP16.49■□□□□ 0.23
HPS1-202ENST00000338546 IQCGQ9H095 443 aaKnown RBP16.49■□□□□ 0.23
HPS1-202ENST00000338546 RABEP2Q9H5N1 569 aa16.49■□□□□ 0.23
HPS1-202ENST00000338546 CHRAC1Q9NRG0 131 aa16.49■□□□□ 0.23
HPS1-202ENST00000338546 CXXC1Q9P0U4 656 aaPredicted RBP16.49■□□□□ 0.23
HPS1-202ENST00000338546 SEPT3Q9UH03 358 aa16.49■□□□□ 0.23
HPS1-202ENST00000338546 TCAF1Q9Y4C2 921 aa16.49■□□□□ 0.23
HPS1-202ENST00000338546 HMX2A2RU54 273 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 TYW5A2RUC4 315 aaKnown RBP16.48■□□□□ 0.23
HPS1-202ENST00000338546 GFRA2O00451 464 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 TLL1O43897 1013 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 UGT1A9O60656 530 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 PMPCBO75439 489 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 PAPSS2O95340 614 aaPredicted RBP16.48■□□□□ 0.23
HPS1-202ENST00000338546 GLUD1P00367 558 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 C8AP07357 584 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 RHOCP08134 193 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 PAMP19021 973 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 EN2P19622 333 aaPredicted RBP16.48■□□□□ 0.23
HPS1-202ENST00000338546 HOXD9P28356 352 aaPredicted RBP16.48■□□□□ 0.23
HPS1-202ENST00000338546 CRHR1P34998 444 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 SPRP35270 261 aaPredicted RBP16.48■□□□□ 0.23
HPS1-202ENST00000338546 ACVRL1P37023 503 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 OXCT1P55809 520 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 ZNF235Q14590 738 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 ITIH4Q14624 930 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 TEDDM1Q5T9Z0 273 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 Q6ZNB5 142 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 NLRP9Q7RTR0 991 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 YTHDF3Q7Z739 585 aaKnown RBP16.48■□□□□ 0.23
HPS1-202ENST00000338546 TMC8Q8IU68 726 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 ANKS4BQ8N8V4 417 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 MRPL43Q8N983 215 aaKnown RBP16.48■□□□□ 0.23
HPS1-202ENST00000338546 HJURPQ8NCD3 748 aaPredicted RBP16.48■□□□□ 0.23
HPS1-202ENST00000338546 ARRDC2Q8TBH0 407 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 GCNAQ96QF7 691 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 TCF25Q9BQ70 676 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 PLCD4Q9BRC7 762 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 UGT1A7Q9HAW7 530 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 UGT1A10Q9HAW8 530 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 UGT1A8Q9HAW9 530 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 LSM7Q9UK45 103 aaKnown RBP16.48■□□□□ 0.23
HPS1-202ENST00000338546 OBSL1O75147 1896 aa16.48■□□□□ 0.23
HPS1-202ENST00000338546 LOC285095A0A1B0GVY8 99 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 HEATR9A2RTY3 570 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 TIMM44O43615 452 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 GREM1O60565 184 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 MMP2P08253 660 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 ITGA2BP08514 1039 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 ERVK-10P10266 1014 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 TPH1P17752 444 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 DDX6P26196 483 aaKnown RBP eCLIP16.47■□□□□ 0.23
HPS1-202ENST00000338546 GABRR2P28476 465 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 ETV4P43268 484 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 POLD2P49005 469 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 RPS24P62847 133 aaKnown RBP16.47■□□□□ 0.23
HPS1-202ENST00000338546 ITKQ08881 620 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 ILF2Q12905 390 aaKnown RBP16.47■□□□□ 0.23
HPS1-202ENST00000338546 DBN1Q16643 649 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 QPCTQ16769 361 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 UGP2Q16851 508 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 MROH9Q5TGP6 573 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 IL31Q6EBC2 164 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 KCNMB4Q86W47 210 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 CNTN4Q8IWV2 1026 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 UNC5BQ8IZJ1 945 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 CCDC197Q8NCU1 140 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 GABPB2Q8TAK5 448 aaPredicted RBP16.47■□□□□ 0.23
HPS1-202ENST00000338546 LRRC8CQ8TDW0 803 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 PEX13Q92968 403 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 ATP2A3Q93084 1043 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 MFSD3Q96ES6 412 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 FEM1CQ96JP0 617 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 CABS1Q96KC9 395 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 PSKH2Q96QS6 385 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 PAIP2Q9BPZ3 127 aaKnown RBP16.47■□□□□ 0.23
HPS1-202ENST00000338546 MGME1Q9BQP7 344 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 MLXIPLQ9NP71 852 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 UBA2Q9UBT2 640 aaPredicted RBP16.47■□□□□ 0.23
HPS1-202ENST00000338546 PLLPQ9Y342 182 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 DENND4CQ5VZ89 1909 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 ALPK3Q96L96 1907 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 TRAV19A0A0A6YYK7 116 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 C2orf71A6NGG8 1288 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 C5orf67F2Z3F1 127 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 GOLGA8RI6L899 631 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 SIN3BO75182 1162 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 RB1P06400 928 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms