RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 MAPK8P45983 427 aa15.55■□□□□ 0.08
PRKN-201ENST00000338468 YBEYP58557 167 aaPredicted RBP15.55■□□□□ 0.08
PRKN-201ENST00000338468 TAS2R38P59533 333 aa15.55■□□□□ 0.08
PRKN-201ENST00000338468 SLC25A11Q02978 314 aaKnown RBP15.55■□□□□ 0.08
PRKN-201ENST00000338468 SFSWAPQ12872 951 aaKnown RBP15.55■□□□□ 0.08
PRKN-201ENST00000338468 SERINC3Q13530 473 aa15.55■□□□□ 0.08
PRKN-201ENST00000338468 PIGHQ14442 188 aaPredicted RBP15.55■□□□□ 0.08
PRKN-201ENST00000338468 ARSIQ5FYB1 569 aa15.55■□□□□ 0.08
PRKN-201ENST00000338468 KCNT1Q5JUK3 1230 aa15.55■□□□□ 0.08
PRKN-201ENST00000338468 PIP5KL1Q5T9C9 394 aa15.55■□□□□ 0.08
PRKN-201ENST00000338468 FAM46CQ5VWP2 391 aa15.55■□□□□ 0.08
PRKN-201ENST00000338468 AFMIDQ63HM1 303 aa15.55■□□□□ 0.08
PRKN-201ENST00000338468 RFX8Q6ZV50 586 aa15.55■□□□□ 0.08
PRKN-201ENST00000338468 TMIEQ8NEW7 156 aa15.55■□□□□ 0.08
PRKN-201ENST00000338468 OR2I1PQ8NGU4 316 aa15.55■□□□□ 0.08
PRKN-201ENST00000338468 OR14C36Q8NHC7 312 aa15.55■□□□□ 0.08
PRKN-201ENST00000338468 SNX19Q92543 992 aa15.55■□□□□ 0.08
PRKN-201ENST00000338468 ISG20Q96AZ6 181 aaKnown RBP15.55■□□□□ 0.08
PRKN-201ENST00000338468 TMEM121BQ9BXQ6 578 aaPredicted RBP15.55■□□□□ 0.08
PRKN-201ENST00000338468 CWC15Q9P013 229 aaKnown RBP15.55■□□□□ 0.08
PRKN-201ENST00000338468 ANAPC7Q9UJX3 599 aa15.55■□□□□ 0.08
PRKN-201ENST00000338468 WDFY3Q8IZQ1 3526 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 LRRC72A6NJI9 287 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 C1QTNF3-AMACRE9PGA6 284 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 SLC7A4O43246 635 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 PLRG1O43660 514 aaKnown RBP15.54■□□□□ 0.08
PRKN-201ENST00000338468 RARAP10276 462 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 HOXB3P14651 431 aaPredicted RBP15.54■□□□□ 0.08
PRKN-201ENST00000338468 ERCC2P18074 760 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 CD27P26842 260 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 HCAR3P49019 387 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 PPP2CBP62714 309 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 PPP2CAP67775 309 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 GRIK2Q13002 908 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 DPYSQ14117 519 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 DPYSL2Q16555 572 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 SMTNL2Q2TAL5 461 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 PARP15Q460N3 678 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 CARD16Q5EG05 197 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 PPP6R3Q5H9R7 873 aaPredicted RBP15.54■□□□□ 0.08
PRKN-201ENST00000338468 ARHGAP12Q8IWW6 846 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 PLPP6Q8IY26 295 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 NPWQ8N729 165 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 NETO2Q8NC67 525 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 GRIN3AQ8TCU5 1115 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 ZCCHC14Q8WYQ9 949 aaKnown RBP15.54■□□□□ 0.08
PRKN-201ENST00000338468 GATA6Q92908 595 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 CCDC114Q96M63 670 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 NCAPGQ9BPX3 1015 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 SCNM1Q9BWG6 230 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 TM6SF2Q9BZW4 377 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 TRIM5Q9C035 493 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 SLC39A8Q9C0K1 460 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 NHEJ1Q9H9Q4 299 aaPredicted RBP15.54■□□□□ 0.08
PRKN-201ENST00000338468 TM9SF3Q9HD45 589 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 OSGEPQ9NPF4 335 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 SPTLC3Q9NUV7 552 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 IL36AQ9UHA7 158 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 IP6K2Q9UHH9 426 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 MFHAS1Q9Y4C4 1052 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 PLXNA2O75051 1894 aa15.54■□□□□ 0.08
PRKN-201ENST00000338468 ASCC3Q8N3C0 2202 aaKnown RBP15.53■□□□□ 0.08
PRKN-201ENST00000338468 FASNP49327 2511 aaKnown RBP15.53■□□□□ 0.08
PRKN-201ENST00000338468 A0A1W2PPC4 97 aa15.53■□□□□ 0.08
PRKN-201ENST00000338468 SRRM3A6NNA2 597 aaPredicted RBP15.53■□□□□ 0.08
PRKN-201ENST00000338468 KPNA3O00505 521 aaPredicted RBP15.53■□□□□ 0.08
PRKN-201ENST00000338468 BUB1O43683 1085 aa15.53■□□□□ 0.08
PRKN-201ENST00000338468 LEFTY1O75610 366 aa15.53■□□□□ 0.08
PRKN-201ENST00000338468 GJB3O75712 270 aa15.53■□□□□ 0.08
PRKN-201ENST00000338468 TMCC1O94876 653 aa15.53■□□□□ 0.08
PRKN-201ENST00000338468 PRNPP04156 253 aa15.53■□□□□ 0.08
PRKN-201ENST00000338468 GKP32189 559 aa15.53■□□□□ 0.08
PRKN-201ENST00000338468 DNA2P51530 1060 aa15.53■□□□□ 0.08
PRKN-201ENST00000338468 CCR5P51681 352 aa15.53■□□□□ 0.08
PRKN-201ENST00000338468 CCNHP51946 323 aaPredicted RBP15.53■□□□□ 0.08
PRKN-201ENST00000338468 BOLA3Q53S33 107 aa15.53■□□□□ 0.08
PRKN-201ENST00000338468 LAYNQ6UX15 382 aa15.53■□□□□ 0.08
PRKN-201ENST00000338468 TC2NQ8N9U0 490 aa15.53■□□□□ 0.08
PRKN-201ENST00000338468 ZNF564Q8TBZ8 553 aaPredicted RBP15.53■□□□□ 0.08
PRKN-201ENST00000338468 CELF6Q96J87 481 aaKnown RBP15.53■□□□□ 0.08
PRKN-201ENST00000338468 HEPHQ9BQS7 1158 aa15.53■□□□□ 0.08
PRKN-201ENST00000338468 GTPBP2Q9BX10 602 aaKnown RBP15.53■□□□□ 0.08
PRKN-201ENST00000338468 ZWILCHQ9H900 591 aa15.53■□□□□ 0.08
PRKN-201ENST00000338468 PDFQ9HBH1 243 aa15.53■□□□□ 0.08
PRKN-201ENST00000338468 ZNHIT6Q9NWK9 470 aaKnown RBP15.53■□□□□ 0.08
PRKN-201ENST00000338468 HPCAL4Q9UM19 191 aa15.53■□□□□ 0.08
PRKN-201ENST00000338468 FARP1Q9Y4F1 1045 aaPredicted RBP15.53■□□□□ 0.08
PRKN-201ENST00000338468 AKAP13Q12802 2813 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 ZSCAN5CA6NGD5 496 aaPredicted RBP15.52■□□□□ 0.08
PRKN-201ENST00000338468 AKR1B15C9JRZ8 316 aaPredicted RBP15.52■□□□□ 0.08
PRKN-201ENST00000338468 J3KR12 359 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 MYO1FO00160 1098 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 WNT9AO14904 365 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 LATO43561 262 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 TOP3BO95985 862 aaKnown RBP15.52■□□□□ 0.08
PRKN-201ENST00000338468 GSRP00390 522 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 SYPP08247 313 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 TPM1P09493 284 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 H2AFZP0C0S5 128 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 RECQLP46063 649 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms