RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 TAF11Q15544 211 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 CFAP157Q5JU67 520 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 WLSQ5T9L3 541 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 ITPRIPL1Q6GPH6 555 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 DENND5AQ6IQ26 1287 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 C4orf22Q6V702 233 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 DEFB128Q7Z7B8 93 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 PIM3Q86V86 326 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 WDR75Q8IWA0 830 aaKnown RBP8.98□□□□□ -0.97
SNCA-201ENST00000336904 RYBPQ8N488 228 aaPredicted RBP8.98□□□□□ -0.97
SNCA-201ENST00000336904 OR6P1Q8NGX9 317 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 CFAP61Q8NHU2 1237 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 NRG4Q8WWG1 115 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 INPP5DQ92835 1189 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 FBXO32Q969P5 355 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 SLC45A3Q96JT2 553 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 GATA5Q9BWX5 397 aaPredicted RBP8.98□□□□□ -0.97
SNCA-201ENST00000336904 COG4Q9H9E3 785 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 NMRAL1Q9HBL8 299 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 ABCC13Q9NSE7 274 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 KCNK4Q9NYG8 393 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 XPR1Q9UBH6 696 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 EYSQ5T1H1 3165 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 CASP8AP2Q9UKL3 1982 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 A0A0D9SEW6 157 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 SIN3BO75182 1162 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 CALB2P22676 271 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 SERPINB8P50452 374 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 WNT3AP56704 352 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 ABCE1P61221 599 aaKnown RBP8.97□□□□□ -0.97
SNCA-201ENST00000336904 SREBF2Q12772 1141 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 TUBB3Q13509 450 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 RIPK1Q13546 671 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 CSHL1Q14406 222 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 PRPSAP1Q14558 356 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 TRIM71Q2Q1W2 868 aaKnown RBP8.97□□□□□ -0.97
SNCA-201ENST00000336904 RTP2Q5QGT7 225 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 CCSAPQ6IQ19 270 aaPredicted RBP8.97□□□□□ -0.97
SNCA-201ENST00000336904 RNF19BQ6ZMZ0 732 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 ZNF598Q86UK7 904 aaKnown RBP8.97□□□□□ -0.97
SNCA-201ENST00000336904 ABI1Q8IZP0 508 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 SH3TC2Q8TF17 1288 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 MRGPRX2Q96LB1 330 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 GLT1D1Q96MS3 346 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 RPRD1AQ96P16 312 aaPredicted RBP8.97□□□□□ -0.97
SNCA-201ENST00000336904 ZNF236Q9UL36 1845 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 CAPN14A8MX76 684 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 ZNF623O75123 536 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 SERPINE1P05121 402 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 SBK3P0C264 359 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 ARSDP51689 593 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 TBX4P57082 545 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 MS4A13Q5J8X5 152 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 SPDYAQ5MJ70 313 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 SWT1Q5T5J6 900 aaKnown RBP8.97□□□□□ -0.97
SNCA-201ENST00000336904 GRTP1Q5TC63 336 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 KYAT3Q6YP21 454 aaKnown RBP8.97□□□□□ -0.97
SNCA-201ENST00000336904 ZC3HC1Q86WB0 502 aaKnown RBP8.97□□□□□ -0.97
SNCA-201ENST00000336904 OR52K2Q8NGK3 314 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 PYDC1Q8WXC3 89 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 PHF21BQ96EK2 531 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 CCDC106Q9BWC9 280 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 ACE2Q9BYF1 805 aaPredicted RBP8.97□□□□□ -0.97
SNCA-201ENST00000336904 PPP1R12CQ9BZL4 782 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 SAR1AQ9NR31 198 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 DCDC2Q9UHG0 476 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 TLK1Q9UKI8 766 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 SOX13Q9UN79 622 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 SZT2Q5T011 3432 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 FAM95CA0A1B0GW59 222 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 MUSKO15146 869 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 GPR39O43194 453 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 TSPAN3O60637 253 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 PQBP1O60828 265 aaKnown RBP8.97□□□□□ -0.97
SNCA-201ENST00000336904 TBX10O75333 385 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 PIGNO95427 931 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 TGDSO95455 350 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 GSTA2P09210 222 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 SLC35E2BP0CK96 405 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 KCNA5P22460 613 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 SP100P23497 879 aaPredicted RBP8.97□□□□□ -0.97
SNCA-201ENST00000336904 GRIA4P48058 902 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 TAS2R39P59534 338 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 CUL3Q13618 768 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 ARTNQ5T4W7 220 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 PDPK2PQ6A1A2 396 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 NAPEPLDQ6IQ20 393 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 FBXL22Q6P050 247 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 COLGALT2Q8IYK4 626 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 CENPLQ8N0S6 344 aaPredicted RBP8.97□□□□□ -0.97
SNCA-201ENST00000336904 FSTL5Q8N475 847 aaPredicted RBP8.97□□□□□ -0.97
SNCA-201ENST00000336904 TDRD5Q8NAT2 981 aaKnown RBP8.97□□□□□ -0.97
SNCA-201ENST00000336904 RAET1EQ8TD07 263 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 BLOC1S5Q8TDH9 187 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 BCL7CQ8WUZ0 217 aaPredicted RBP8.97□□□□□ -0.97
SNCA-201ENST00000336904 PGAP3Q96FM1 320 aaPredicted RBP8.97□□□□□ -0.97
SNCA-201ENST00000336904 CATSPER2Q96P56 530 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 IL22Q9GZX6 179 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 SMOC2Q9H3U7 446 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 SP110Q9HB58 689 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms