RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 XIAPP98170 497 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 HSF2Q03933 536 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 GATAD2AQ86YP4 633 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 DEFB106AQ8N104 65 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 POC5Q8NA72 575 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 PIWIL2Q8TC59 973 aaKnown RBP13.23□□□□□ -0.29
HLCS-201ENST00000336648 DGCR14Q96DF8 476 aaKnown RBP13.23□□□□□ -0.29
HLCS-201ENST00000336648 TSPAN18Q96SJ8 248 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 CCDC28BQ9BUN5 200 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 RTFDC1Q9BY42 306 aaPredicted RBP13.23□□□□□ -0.29
HLCS-201ENST00000336648 A0A0A0MRY4 1105 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 LTFP02788 710 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 PPIBP23284 216 aaKnown RBP13.23□□□□□ -0.29
HLCS-201ENST00000336648 PSEN1P49768 467 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 TRAP1Q12931 704 aaKnown RBP13.23□□□□□ -0.29
HLCS-201ENST00000336648 EIF2S3LQ2VIR3 472 aaKnown RBP13.23□□□□□ -0.29
HLCS-201ENST00000336648 SUN5Q8TC36 379 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 CKAP2Q8WWK9 683 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 AP3S1Q92572 193 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 SLC35C1Q96A29 364 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 FAM136AQ96C01 138 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 SPATA13Q96N96 652 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 XPNPEP3Q9NQH7 507 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 ARL15Q9NXU5 204 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 PCDHGC5Q9Y5F6 944 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 BTNL10A8MVZ5 291 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 ENDOD1O94919 500 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 PIGNO95427 931 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 ENO2P09104 434 aaPredicted RBP13.23□□□□□ -0.29
HLCS-201ENST00000336648 UMPSP11172 480 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 IL12AP29459 219 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 PYDC2Q56P42 97 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 ZNF549Q6P9A3 640 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 ETNK2Q9NVF9 386 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 COQ6Q9Y2Z9 468 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 PCDHA11Q9Y5I1 949 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 A0A0X1KG70 313 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 DCXO43602 365 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 FGRP09769 529 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 INSRRP14616 1297 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 PRKCIP41743 596 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 SMCO1Q147U7 214 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 SETMARQ53H47 684 aaPredicted RBP13.23□□□□□ -0.29
HLCS-201ENST00000336648 LGI2Q8N0V4 545 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 C2orf49Q9BVC5 232 aaPredicted RBP13.23□□□□□ -0.29
HLCS-201ENST00000336648 SPATC1LQ9H0A9 340 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 WBP11Q9Y2W2 641 aaKnown RBP13.23□□□□□ -0.29
HLCS-201ENST00000336648 ZNF879B4DU55 563 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 KHDRBS3O75525 346 aaKnown RBP13.23□□□□□ -0.29
HLCS-201ENST00000336648 DPEP1P16444 411 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 MIPP30301 263 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 STXBP5Q5T5C0 1151 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 ABRAXAS1Q6UWZ7 409 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 ZNF554Q86TJ5 538 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 RASSF5Q8WWW0 418 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 FUCA2Q9BTY2 467 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 TLR10Q9BXR5 811 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 AGXT2Q9BYV1 514 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 CCDC167Q9P0B6 97 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 TBC1D30Q9Y2I9 924 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 NCOA3Q9Y6Q9 1424 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 ATP4AP20648 1035 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 SSTR1P30872 391 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 NR1H2P55055 460 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 AFTPHQ6ULP2 937 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 SAMD7Q7Z3H4 446 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 AKAP14Q86UN6 197 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 KIAA0895Q8NCT3 520 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 WNT8BQ93098 351 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 HSFY1Q96LI6 401 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 KLHL32Q96NJ5 620 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 OSMRQ99650 979 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 PIF1Q9H611 641 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 RNPEPL1Q9HAU8 725 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 SPHKAPQ2M3C7 1700 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 GSAPA4D1B5 854 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 URADA6NGE7 173 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 SNRPB2P08579 225 aaKnown RBP13.22□□□□□ -0.29
HLCS-201ENST00000336648 TPH1P17752 444 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 SFRP1Q8N474 314 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 OR7A2PQ8NGA2 310 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 SOCS4Q8WXH5 440 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 PLEKHG4BQ96PX9 1271 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 KCND1Q9NSA2 647 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 BAIAP2Q9UQB8 552 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 CEMIPQ8WUJ3 1361 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 CLUHO75153 1309 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 MAGEC1O60732 1142 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 PRKAR1AP10644 381 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 KDELR1P24390 212 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 TTPAP49638 278 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 EFR3AQ14156 821 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 KBTBD2Q8IY47 623 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 RP9Q8TA86 221 aaKnown RBP13.22□□□□□ -0.29
HLCS-201ENST00000336648 DNAJC18Q9H819 358 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 TRPV2Q9Y5S1 764 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 CASTOR2A6NHX0 329 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 SIGLEC16A6NMB1 481 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 TRIM38O00635 465 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 CYP3A4P08684 503 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms