RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 FCRL5Q96RD9 977 aa23.72■■□□□ 1.39
NDEL1-201ENST00000334527 ACBD6Q9BR61 282 aa23.72■■□□□ 1.39
NDEL1-201ENST00000334527 G3BP2Q9UN86 482 aaKnown RBP23.72■■□□□ 1.39
NDEL1-201ENST00000334527 ACOT9Q9Y305 439 aa23.72■■□□□ 1.39
NDEL1-201ENST00000334527 THRAP10827 490 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 CYP2C18P33260 490 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 LPCAT4Q643R3 524 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 ESRP1Q6NXG1 681 aaKnown RBP23.71■■□□□ 1.39
NDEL1-201ENST00000334527 LCA5Q86VQ0 697 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 METTL23Q86XA0 190 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 PPHLN1Q8NEY8 458 aaKnown RBP23.71■■□□□ 1.39
NDEL1-201ENST00000334527 FTHL17Q9BXU8 183 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 NUF2Q9BZD4 464 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 ARHGEF38Q9NXL2 777 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 ZDHHC2Q9UIJ5 367 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 MRPL42Q9Y6G3 142 aaKnown RBP23.71■■□□□ 1.39
NDEL1-201ENST00000334527 COL4A4P53420 1690 aaPredicted RBP23.71■■□□□ 1.39
NDEL1-201ENST00000334527 MYADML2A6NDP7 307 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 AIM2O14862 343 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 GRID2O43424 1007 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 IGLV3-25P01717 112 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 TFEBP19484 476 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 NUDT2P50583 147 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 HK2P52789 917 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 PRKAA1Q13131 559 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 PPM1LQ5SGD2 360 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 DENND5AQ6IQ26 1287 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 SNX32Q86XE0 403 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 CNTN4Q8IWV2 1026 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 SYT17Q9BSW7 474 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 ASB3Q9Y575 518 aa23.71■■□□□ 1.39
NDEL1-201ENST00000334527 MAFKO60675 156 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 B3GAT3O94766 335 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 LYNP07948 512 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 COL6A2P12110 1019 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 BRCC3P46736 316 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 RAB10P61026 200 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 ACAD11Q709F0 780 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 PDSS2Q86YH6 399 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 CEP97Q8IW35 865 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 MFSD6LQ8IWD5 586 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 PHC3Q8NDX5 983 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 HASPINQ8TF76 798 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 PPP2R3CQ969Q6 453 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 CNDP1Q96KN2 507 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 TMEM209Q96SK2 561 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 IL12RB2Q99665 862 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 EBF3Q9H4W6 596 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 CHST12Q9NRB3 414 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 XPR1Q9UBH6 696 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 FAM95CA0A1B0GW59 222 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 TARM1B6A8C7 271 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 IRAK2O43187 625 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 SMIM24O75264 130 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 PGK1P00558 417 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 RAG1P15918 1043 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 IFT43Q96FT9 208 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 DDX50Q9BQ39 737 aaKnown RBP23.7■■□□□ 1.38
NDEL1-201ENST00000334527 SLC39A8Q9C0K1 460 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 VCX3BQ9H321 246 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 SLC2A6Q9UGQ3 507 aa23.7■■□□□ 1.38
NDEL1-201ENST00000334527 RGSL1A5PLK6 1076 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 MATN3O15232 486 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 DLX3O60479 287 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 PAGE1O75459 146 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 POMCP01189 267 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 CHRNA1P02708 482 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 STMN1P16949 149 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 ARNTP27540 789 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 ARCN1P48444 511 aaKnown RBP23.69■■□□□ 1.38
NDEL1-201ENST00000334527 SCML4Q8N228 414 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 SPATA6LQ8N4H0 392 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 GDPD5Q8WTR4 605 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 NXNL1Q96CM4 212 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 TRIM62Q9BVG3 475 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 KLHL4Q9C0H6 718 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 TCAF1Q9Y4C2 921 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 FNDC1Q4ZHG4 1894 aaPredicted RBP23.69■■□□□ 1.38
NDEL1-201ENST00000334527 ZCCHC18P0CG32 403 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 GEMP55040 296 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 FKBP1BP68106 108 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 EIF4EBP2Q13542 120 aaPredicted RBP23.69■■□□□ 1.38
NDEL1-201ENST00000334527 HNRNPDQ14103 355 aaKnown RBP23.69■■□□□ 1.38
NDEL1-201ENST00000334527 KDELC2Q7Z4H8 507 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 LRRTM3Q86VH5 581 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 LSMEM2Q8N112 164 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 HAPLN3Q96S86 360 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 UNKQ9C0B0 810 aaKnown RBP23.69■■□□□ 1.38
NDEL1-201ENST00000334527 SENP6Q9GZR1 1112 aaPredicted RBP23.69■■□□□ 1.38
NDEL1-201ENST00000334527 VTI1BQ9UEU0 232 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 SFMBT1Q9UHJ3 866 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 PACSIN3Q9UKS6 424 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 CDYLQ9Y232 598 aa23.69■■□□□ 1.38
NDEL1-201ENST00000334527 MYLKQ15746 1914 aa23.68■■□□□ 1.38
NDEL1-201ENST00000334527 ENO4A6NNW6 628 aa23.68■■□□□ 1.38
NDEL1-201ENST00000334527 MSI1O43347 362 aaKnown RBP23.68■■□□□ 1.38
NDEL1-201ENST00000334527 PMPCBO75439 489 aa23.68■■□□□ 1.38
NDEL1-201ENST00000334527 PEX2P28328 305 aa23.68■■□□□ 1.38
NDEL1-201ENST00000334527 SLC1A2P43004 574 aa23.68■■□□□ 1.38
NDEL1-201ENST00000334527 SFT2D3Q587I9 215 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms