RNA–Protein interactions for RNA: ENST00000333479.11

KNTC1-201, Transcript of kinetochore associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNTC1, Length 6,975 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-201ENST00000333479 TBL3Q12788 808 aaKnown RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 ZNF423Q2M1K9 1284 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 FAM83EQ2M2I3 478 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 RALGPS1Q5JS13 557 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 AGAP9Q5VTM2 703 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 ARMCX6Q7L4S7 300 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 FAM129CQ86XR2 697 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 KRT73Q86Y46 540 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 TRIM59Q8IWR1 403 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 SLC25A41Q8N5S1 370 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 PTGES2Q9H7Z7 377 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 TRMT13Q9NUP7 481 aaKnown RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 REV1Q9UBZ9 1251 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 TRPS1Q9UHF7 1281 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 DMGDHQ9UI17 866 aaKnown RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 SLC6A14Q9UN76 642 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 RIPK3Q9Y572 518 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 ATRNL1Q5VV63 1379 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 A0A1B0GTW7 788 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 SPATA31C2B4DYI2 1134 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 H0Y3Z8 333 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 H3BQF6 201 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 GLSO94925 669 aaPredicted RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 ECDO95905 644 aaPredicted RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 HRH2P25021 359 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 ICAM3P32942 547 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 MAPKAPK2P49137 400 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 NEK2P51955 445 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 ARSFP54793 590 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 DEPDC1Q5TB30 811 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 IYDQ6PHW0 289 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 IKBIPQ70UQ0 350 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 PLXDC1Q8IUK5 500 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 HID1Q8IV36 788 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 OR10Q1Q8NGQ4 319 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 RP9Q8TA86 221 aaKnown RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 FER1L6-AS2Q96M78 137 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 MLPHQ9BV36 600 aaPredicted RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 TRIM31Q9BZY9 425 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 DPY30Q9C005 99 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 SRMSQ9H3Y6 488 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 WDR26Q9H7D7 661 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 KCNK4Q9NYG8 393 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 ZC3H7BQ9UGR2 993 aaKnown RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 PCSK1NQ9UHG2 260 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 ZNF232Q9UNY5 417 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 C10orf71Q711Q0 1435 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 ASTN1O14525 1302 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 POTEMA6NI47 508 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 ERI2A8K979 691 aaKnown RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 H3BNC9 293 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 ZSCAN9O15535 394 aaPredicted RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 CSDE1O75534 798 aaKnown RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 RECQL4O94761 1208 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 STIP1P31948 543 aaKnown RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 FOLR3P41439 243 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 ACOT2P49753 483 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 TUBP50607 506 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 NOVA1P51513 510 aaKnown RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 BLVRAP53004 296 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 CDH4P55283 916 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 RRP1BQ14684 758 aaKnown RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 PTGES3Q15185 160 aaKnown RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 KRT31Q15323 416 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 TARBP2Q15633 366 aaKnown RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 TBCELQ5QJ74 424 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 NAA35Q5VZE5 725 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 SMYD5Q6GMV2 418 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 ANO7Q6IWH7 933 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 KIAA1161Q6NSJ0 714 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 APOBEC3HQ6NTF7 200 aaKnown RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 POTEGQ6S5H5 508 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 KRT77Q7Z794 578 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 SIX5Q8N196 739 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 PIAS4Q8N2W9 510 aaPredicted RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 CLEC1AQ8NC01 280 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 FAM76AQ8TAV0 307 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 TAS1R2Q8TE23 839 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 NANOS1Q8WY41 292 aaKnown RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 CMKLR1Q99788 373 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 ELAC2Q9BQ52 826 aaKnown RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 HDHD5Q9BXW7 423 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 RBM12Q9NTZ6 932 aaKnown RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 CHORDC1Q9UHD1 332 aaPredicted RBP3.87□□□□□ -1.79
KNTC1-201ENST00000333479 GPR34Q9UPC5 381 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 AURKCQ9UQB9 309 aa3.87□□□□□ -1.79
KNTC1-201ENST00000333479 CHRM1P11229 460 aaPredicted RBP3.86□□□□□ -1.79
KNTC1-201ENST00000333479 PCNAP12004 261 aa3.86□□□□□ -1.79
KNTC1-201ENST00000333479 PAICSP22234 425 aaKnown RBP3.86□□□□□ -1.79
KNTC1-201ENST00000333479 S100A7P31151 101 aa3.86□□□□□ -1.79
KNTC1-201ENST00000333479 CTNNA1P35221 906 aaKnown RBP3.86□□□□□ -1.79
KNTC1-201ENST00000333479 RFX3P48380 749 aa3.86□□□□□ -1.79
KNTC1-201ENST00000333479 CARSP49589 748 aaKnown RBP3.86□□□□□ -1.79
KNTC1-201ENST00000333479 EEF1A1P68104 462 aaKnown RBP3.86□□□□□ -1.79
KNTC1-201ENST00000333479 EEF1A2Q05639 463 aaKnown RBP3.86□□□□□ -1.79
KNTC1-201ENST00000333479 EFTUD2Q15029 972 aaKnown RBP eCLIP3.86□□□□□ -1.798e-7■■■□□ 17.4
KNTC1-201ENST00000333479 EEF1A1P5Q5VTE0 462 aa3.86□□□□□ -1.79
KNTC1-201ENST00000333479 GDF6Q6KF10 455 aaPredicted RBP3.86□□□□□ -1.79
KNTC1-201ENST00000333479 C16orf46Q6P387 395 aa3.86□□□□□ -1.79
KNTC1-201ENST00000333479 AFTPHQ6ULP2 937 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms