RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 KDM1BQ8NB78 822 aa23.94■■□□□ 1.42
TSKU-201ENST00000333090 DIS3LQ8TF46 1054 aaKnown RBP23.94■■□□□ 1.42
TSKU-201ENST00000333090 C18orf25Q96B23 403 aaPredicted RBP23.94■■□□□ 1.42
TSKU-201ENST00000333090 MAML3Q96JK9 1138 aa23.94■■□□□ 1.42
TSKU-201ENST00000333090 SLC29A1Q99808 456 aa23.94■■□□□ 1.42
TSKU-201ENST00000333090 MCMBPQ9BTE3 642 aa23.94■■□□□ 1.42
TSKU-201ENST00000333090 SOCS7O14512 581 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 TSPAN1O60635 241 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 PRKAA2P54646 552 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 ADIGQ0VDE8 80 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 OTUD1Q5VV17 481 aaPredicted RBP23.93■■□□□ 1.42
TSKU-201ENST00000333090 UNC93AQ86WB7 457 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 SLC41A1Q8IVJ1 513 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 CENPLQ8N0S6 344 aaPredicted RBP23.93■■□□□ 1.42
TSKU-201ENST00000333090 KLHL23Q8NBE8 558 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 SNRNP27Q8WVK2 155 aaKnown RBP23.93■■□□□ 1.42
TSKU-201ENST00000333090 HSPBAP1Q96EW2 488 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 MLPHQ9BV36 600 aaPredicted RBP23.93■■□□□ 1.42
TSKU-201ENST00000333090 MYRFQ9Y2G1 1151 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 FAM72CH0Y354 149 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 CDK9P50750 372 aaKnown RBP23.93■■□□□ 1.42
TSKU-201ENST00000333090 Q3C1V9 767 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 FAM72AQ5TYM5 149 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 FAM72DQ6L9T8 149 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 LRRC8EQ6NSJ5 796 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 TRIM67Q6ZTA4 783 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 CARM1Q86X55 608 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 FAM72BQ86X60 149 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 MIPOL1Q8TD10 442 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 SGF29Q96ES7 293 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 GTSE1Q9NYZ3 720 aa23.93■■□□□ 1.42
TSKU-201ENST00000333090 POLR2AP24928 1970 aaKnown RBP23.93■■□□□ 1.42
TSKU-201ENST00000333090 ADM5C9JUS6 153 aa23.92■■□□□ 1.42
TSKU-201ENST00000333090 DCLK1O15075 740 aa23.92■■□□□ 1.42
TSKU-201ENST00000333090 TXNP10599 105 aaKnown RBP23.92■■□□□ 1.42
TSKU-201ENST00000333090 ARSAP15289 507 aa23.92■■□□□ 1.42
TSKU-201ENST00000333090 ERCC2P18074 760 aa23.92■■□□□ 1.42
TSKU-201ENST00000333090 CD68P34810 354 aaPredicted RBP23.92■■□□□ 1.42
TSKU-201ENST00000333090 ACADSBP45954 432 aa23.92■■□□□ 1.42
TSKU-201ENST00000333090 SLC12A1Q13621 1099 aa23.92■■□□□ 1.42
TSKU-201ENST00000333090 RMND5BQ96G75 393 aaPredicted RBP23.92■■□□□ 1.42
TSKU-201ENST00000333090 RHOJQ9H4E5 214 aa23.92■■□□□ 1.42
TSKU-201ENST00000333090 TRPC7Q9HCX4 862 aa23.92■■□□□ 1.42
TSKU-201ENST00000333090 ERAP1Q9NZ08 941 aa23.92■■□□□ 1.42
TSKU-201ENST00000333090 SUCOQ9UBS9 1254 aaKnown RBP23.92■■□□□ 1.42
TSKU-201ENST00000333090 SDHDO14521 159 aa23.92■■□□□ 1.42
TSKU-201ENST00000333090 HDCP19113 662 aa23.92■■□□□ 1.42
TSKU-201ENST00000333090 CYP2B6P20813 491 aa23.92■■□□□ 1.42
TSKU-201ENST00000333090 NDST2P52849 883 aa23.92■■□□□ 1.42
TSKU-201ENST00000333090 RHDQ02161 417 aa23.92■■□□□ 1.42
TSKU-201ENST00000333090 FRG1Q14331 258 aaKnown RBP23.92■■□□□ 1.42
TSKU-201ENST00000333090 KCTD11Q693B1 232 aa23.92■■□□□ 1.42
TSKU-201ENST00000333090 KLHL35Q6PF15 583 aa23.92■■□□□ 1.42
TSKU-201ENST00000333090 HERC6Q8IVU3 1022 aa23.92■■□□□ 1.42
TSKU-201ENST00000333090 SLC16A10Q8TF71 515 aa23.92■■□□□ 1.42
TSKU-201ENST00000333090 LPGAT1Q92604 370 aa23.92■■□□□ 1.42
TSKU-201ENST00000333090 PPWD1Q96BP3 646 aaKnown RBP23.92■■□□□ 1.42
TSKU-201ENST00000333090 H3BNH8 94 aa23.91■■□□□ 1.42
TSKU-201ENST00000333090 ZSCAN9O15535 394 aaPredicted RBP23.91■■□□□ 1.42
TSKU-201ENST00000333090 C8BP07358 591 aa23.91■■□□□ 1.42
TSKU-201ENST00000333090 IMPDH2P12268 514 aa23.91■■□□□ 1.42
TSKU-201ENST00000333090 NFKB1P19838 968 aa23.91■■□□□ 1.42
TSKU-201ENST00000333090 CDH15P55291 814 aa23.91■■□□□ 1.42
TSKU-201ENST00000333090 POU5F1BQ06416 359 aa23.91■■□□□ 1.42
TSKU-201ENST00000333090 GJC2Q5T442 439 aaPredicted RBP23.91■■□□□ 1.42
TSKU-201ENST00000333090 DUS1LQ6P1R4 473 aaKnown RBP23.91■■□□□ 1.42
TSKU-201ENST00000333090 OTUD5Q96G74 571 aa23.91■■□□□ 1.42
TSKU-201ENST00000333090 NOL11Q9H8H0 719 aaKnown RBP23.91■■□□□ 1.42
TSKU-201ENST00000333090 OLAHQ9NV23 265 aa23.91■■□□□ 1.42
TSKU-201ENST00000333090 SNTG2Q9NY99 539 aa23.91■■□□□ 1.42
TSKU-201ENST00000333090 HNRNPCP07910 306 aaKnown RBP eCLIP23.91■■□□□ 1.42
TSKU-201ENST00000333090 HNRNPLP14866 589 aaKnown RBP eCLIP23.91■■□□□ 1.42
TSKU-201ENST00000333090 HADHAP40939 763 aa23.91■■□□□ 1.42
TSKU-201ENST00000333090 ALDH3B2P48448 385 aa23.91■■□□□ 1.42
TSKU-201ENST00000333090 POTEHQ6S545 545 aa23.91■■□□□ 1.42
TSKU-201ENST00000333090 PIGZQ86VD9 579 aa23.91■■□□□ 1.42
TSKU-201ENST00000333090 APOBEC3FQ8IUX4 373 aaKnown RBP23.91■■□□□ 1.42
TSKU-201ENST00000333090 NXNL1Q96CM4 212 aa23.91■■□□□ 1.42
TSKU-201ENST00000333090 PNPLA3Q9NST1 481 aa23.91■■□□□ 1.42
TSKU-201ENST00000333090 UTP6Q9NYH9 597 aaKnown RBP23.91■■□□□ 1.42
TSKU-201ENST00000333090 GPRC5DQ9NZD1 345 aa23.91■■□□□ 1.42
TSKU-201ENST00000333090 FAF1Q9UNN5 650 aaPredicted RBP23.91■■□□□ 1.42
TSKU-201ENST00000333090 ACOT9Q9Y305 439 aa23.91■■□□□ 1.42
TSKU-201ENST00000333090 MAGEB16A2A368 324 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 TARM1B6A8C7 271 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 GNL1P36915 607 aaPredicted RBP23.9■■□□□ 1.42
TSKU-201ENST00000333090 ZBTB17Q13105 803 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 ZNF618Q5T7W0 954 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 SYPL2Q5VXT5 272 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 SNX31Q8N9S9 440 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 HSFY1Q96LI6 401 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 UNC93B1Q9H1C4 597 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 PDGFCQ9NRA1 345 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 PIGVQ9NUD9 493 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 CCDC167Q9P0B6 97 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.9■■□□□ 1.42
TSKU-201ENST00000333090 LOC285556D6RIA3 1793 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 PRORSD1PA6NEY8 169 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 TRPC5OSA6NMA1 111 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 H0YJX3 145 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms