RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 MCPH1Q8NEM0 835 aa18.4■□□□□ 0.54
PKP3-201ENST00000331563 NAA50Q9GZZ1 169 aaKnown RBP18.4■□□□□ 0.54
PKP3-201ENST00000331563 GPATCH2LQ9NWQ4 482 aa18.4■□□□□ 0.54
PKP3-201ENST00000331563 QPCTLQ9NXS2 382 aa18.4■□□□□ 0.54
PKP3-201ENST00000331563 FBXO40Q9UH90 709 aa18.4■□□□□ 0.54
PKP3-201ENST00000331563 ERGIC3Q9Y282 383 aa18.4■□□□□ 0.54
PKP3-201ENST00000331563 PRPSAP2O60256 369 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 NEDD8Q15843 81 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 MCUQ8NE86 351 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 SLC7A3Q8WY07 619 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 SLC10A4Q96EP9 437 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 PEBP4Q96S96 227 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 ASNSD1Q9NWL6 643 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 KPNA7A9QM74 516 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 CXCL11O14625 94 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 APOL1O14791 398 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 CLASP2O75122 1294 aaKnown RBP18.39■□□□□ 0.53
PKP3-201ENST00000331563 TIPRLO75663 272 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 MYL6P60660 151 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 KCTD2Q14681 263 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 STILQ15468 1287 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 DPH6Q7L8W6 267 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 PPP1R13LQ8WUF5 828 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 ASB9Q96DX5 294 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 CNDP1Q96KN2 507 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 RNF157Q96PX1 679 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 CPXM1Q96SM3 734 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 NPLQ9BXD5 320 aaPredicted RBP18.39■□□□□ 0.53
PKP3-201ENST00000331563 DAPK2Q9UIK4 370 aa18.39■□□□□ 0.53
PKP3-201ENST00000331563 HDAC3O15379 428 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 JAK1P23458 1154 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 ICAM3P32942 547 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 RALGDSQ12967 914 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 ORC1Q13415 861 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 TRIM25Q14258 630 aaKnown RBP18.38■□□□□ 0.53
PKP3-201ENST00000331563 RAB39AQ14964 217 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 INSCQ1MX18 579 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 GALNT18Q6P9A2 607 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 USP50Q70EL3 339 aaPredicted RBP18.38■□□□□ 0.53
PKP3-201ENST00000331563 ZNF534Q76KX8 674 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 FNIP1Q8TF40 1166 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 CGRRF1Q99675 332 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 ADPGKQ9BRR6 497 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 DHX35Q9H5Z1 703 aaKnown RBP18.38■□□□□ 0.53
PKP3-201ENST00000331563 SACM1LQ9NTJ5 587 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 CORINQ9Y5Q5 1042 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 GPR25O00155 361 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 TRIM13O60858 407 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 ATG7O95352 703 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 TFE3P19532 575 aaPredicted RBP18.38■□□□□ 0.53
PKP3-201ENST00000331563 EDNRBP24530 442 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 GARSP41250 739 aaKnown RBP18.38■□□□□ 0.53
PKP3-201ENST00000331563 ENPEPQ07075 957 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 RAB6CQ53S08 254 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 FAM102AQ5T9C2 384 aaPredicted RBP18.38■□□□□ 0.53
PKP3-201ENST00000331563 ANKRD26P1Q6NSI1 321 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 CES3Q6UWW8 571 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 PLD6Q8N2A8 252 aaKnown RBP18.38■□□□□ 0.53
PKP3-201ENST00000331563 TNIP2Q8NFZ5 429 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 HPS1Q92902 700 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 RAB6CQ9H0N0 254 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 ARHGAP28Q9P2N2 729 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 RABL2AQ9UBK7 228 aaPredicted RBP18.38■□□□□ 0.53
PKP3-201ENST00000331563 CYTH4Q9UIA0 394 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 CDYLQ9Y232 598 aa18.38■□□□□ 0.53
PKP3-201ENST00000331563 SOCS2O14508 198 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 CCR10P46092 362 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 PSME3P61289 254 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 RHDQ02161 417 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 PPIL2Q13356 520 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 CYGBQ8WWM9 190 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 LPGAT1Q92604 370 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 CENPOQ9BU64 300 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 SNX15Q9NRS6 342 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 KCNH4Q9UQ05 1017 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 GLTPD2A6NH11 291 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 K7ERI5 159 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 F7P08709 466 aaPredicted RBP18.37■□□□□ 0.53
PKP3-201ENST00000331563 ERVK-10P10266 1014 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 NHSL2Q5HYW2 709 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 KCNT2Q6UVM3 1135 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 ITIH5Q86UX2 942 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 TTC39CQ8N584 583 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 PQLC3Q8N755 202 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 ZNF420Q8TAQ5 688 aaPredicted RBP18.37■□□□□ 0.53
PKP3-201ENST00000331563 APBA2Q99767 749 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 ZFYVE28Q9HCC9 887 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 NXF1Q9UBU9 619 aaKnown RBP18.37■□□□□ 0.53
PKP3-201ENST00000331563 IFT52Q9Y366 437 aa18.37■□□□□ 0.53
PKP3-201ENST00000331563 C9IYK1 514 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 C15orf59Q2T9L4 293 aaPredicted RBP18.36■□□□□ 0.53
PKP3-201ENST00000331563 LRRC8EQ6NSJ5 796 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 CHSY3Q70JA7 882 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 ZBTB33Q86T24 672 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 ZC3H7AQ8IWR0 971 aaKnown RBP18.36■□□□□ 0.53
PKP3-201ENST00000331563 SIX5Q8N196 739 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 PBXIP1Q96AQ6 731 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 GATA5Q9BWX5 397 aaPredicted RBP18.36■□□□□ 0.53
PKP3-201ENST00000331563 KLHL25Q9H0H3 589 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 RNF103-CHMP3A0A140T963 221 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms