RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 PEX11AO75192 247 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 CCNYL3P0C7X3 344 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 PSMD8P48556 350 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 SNRPFP62306 86 aaKnown RBP10.68□□□□□ -0.7
CLN8-201ENST00000331222 KCNT2Q6UVM3 1135 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 EIF3MQ7L2H7 374 aaKnown RBP10.68□□□□□ -0.7
CLN8-201ENST00000331222 ADGRG6Q86SQ4 1221 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 DHFR2Q86XF0 187 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 FAM98AQ8NCA5 519 aaKnown RBP10.68□□□□□ -0.7
CLN8-201ENST00000331222 OR6Y1Q8NGX8 325 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 KLK6Q92876 244 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 NKD1Q969G9 470 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 PLOD3O60568 738 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 UQCRBP14927 111 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 IFNGR2P38484 337 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 PIK3CGP48736 1102 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 VGLL4Q14135 290 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 PMF1Q6P1K2 205 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 C3orf20Q8ND61 904 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 OR52L1Q8NGH7 329 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 VANGL1Q8TAA9 524 aaPredicted RBP10.68□□□□□ -0.7
CLN8-201ENST00000331222 LMLNQ96KR4 655 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 DEFB118Q96PH6 123 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 MLPHQ9BV36 600 aaPredicted RBP10.68□□□□□ -0.7
CLN8-201ENST00000331222 CNPPD1Q9BV87 410 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 MAGEA13PA6NCF6 341 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 UBOX5O94941 541 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 SPIBQ01892 262 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 PPIL2Q13356 520 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 CYP2A13Q16696 494 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 SPANXN3Q5MJ09 141 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 ZNF655Q8N720 491 aaPredicted RBP10.68□□□□□ -0.7
CLN8-201ENST00000331222 ADCY4Q8NFM4 1077 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 ZDHHC15Q96MV8 337 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 GPER1Q99527 375 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 BDH2Q9BUT1 245 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 CRISPLD1Q9H336 500 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 ZSCAN5CA6NGD5 496 aaPredicted RBP10.68□□□□□ -0.7
CLN8-201ENST00000331222 MANSC4A6NHS7 340 aaPredicted RBP10.68□□□□□ -0.7
CLN8-201ENST00000331222 SSNA1O43805 119 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 OR5F1O95221 314 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 WARSP23381 471 aaKnown RBP10.68□□□□□ -0.7
CLN8-201ENST00000331222 RBL1P28749 1068 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 CACNA2D1P54289 1103 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 SNRPD1P62314 119 aaKnown RBP10.68□□□□□ -0.7
CLN8-201ENST00000331222 CXCL9Q07325 125 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 SEMA5AQ13591 1074 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 COL9A2Q14055 689 aaPredicted RBP10.68□□□□□ -0.7
CLN8-201ENST00000331222 KYQ8NBH2 561 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 NDRG1Q92597 394 aaKnown RBP10.68□□□□□ -0.7
CLN8-201ENST00000331222 TRIM63Q969Q1 353 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 CDRT15Q96T59 188 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 TINF2Q9BSI4 451 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 BRINP2Q9C0B6 783 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 CEP44Q9C0F1 390 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 ACP6Q9NPH0 428 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 EVA1BQ9NVM1 165 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 EHD3Q9NZN3 535 aa10.68□□□□□ -0.7
CLN8-201ENST00000331222 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.68□□□□□ -0.7
CLN8-201ENST00000331222 TOP3BO95985 862 aaKnown RBP10.67□□□□□ -0.7
CLN8-201ENST00000331222 HNRNPH1P31943 449 aaKnown RBP10.67□□□□□ -0.7
CLN8-201ENST00000331222 MGAT5Q09328 741 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 TTC23Q5W5X9 447 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 SLC27A1Q6PCB7 646 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 PRR23BQ6ZRT6 265 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 CLVS1Q8IUQ0 354 aaPredicted RBP10.67□□□□□ -0.7
CLN8-201ENST00000331222 CD302Q8IX05 232 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 ZNF276Q8N554 614 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 LRRC39Q96DD0 335 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 TTLL2Q9BWV7 592 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 C17orf75Q9HAS0 396 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 BTBD3Q9Y2F9 522 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 AFDNP55196 1824 aaKnown RBP10.67□□□□□ -0.7
CLN8-201ENST00000331222 A0A088AWK7 358 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 ZNF10P21506 573 aaPredicted RBP10.67□□□□□ -0.7
CLN8-201ENST00000331222 CALB2P22676 271 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 MAT2AP31153 395 aaKnown RBP10.67□□□□□ -0.7
CLN8-201ENST00000331222 SREBF1P36956 1147 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 IL12RB1P42701 662 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 HSPA13P48723 471 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 ITGADQ13349 1161 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 ANKS1BQ7Z6G8 1248 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.67□□□□□ -0.7
CLN8-201ENST00000331222 ZNF606Q8WXB4 792 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 KAT5Q92993 513 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 VPS35Q96QK1 796 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 GAS2L1Q99501 681 aaPredicted RBP10.67□□□□□ -0.7
CLN8-201ENST00000331222 LGMNQ99538 433 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 GAL3ST1Q99999 423 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 C1orf50Q9BV19 199 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 BRD9Q9H8M2 597 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 BCORL1Q5H9F3 1711 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 FAM92AA1XBS5 289 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 KPNA6O60684 536 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 ATP5F1P24539 256 aaPredicted RBP10.67□□□□□ -0.7
CLN8-201ENST00000331222 RPL9P32969 192 aaKnown RBP10.67□□□□□ -0.7
CLN8-201ENST00000331222 MRPS22P82650 360 aaKnown RBP10.67□□□□□ -0.7
CLN8-201ENST00000331222 ACAP2Q15057 778 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 CYB5D1Q6P9G0 228 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 DEFB119Q8N690 84 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms