RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 IL4RP24394 825 aa24.65■■□□□ 1.54
SOX1-201ENST00000330949 SPRP35270 261 aaPredicted RBP24.65■■□□□ 1.54
SOX1-201ENST00000330949 PRKAA2P54646 552 aa24.65■■□□□ 1.54
SOX1-201ENST00000330949 MPP1Q00013 466 aa24.65■■□□□ 1.54
SOX1-201ENST00000330949 CAMK2BQ13554 666 aa24.65■■□□□ 1.54
SOX1-201ENST00000330949 SAMD4BQ5PRF9 694 aaKnown RBP24.65■■□□□ 1.54
SOX1-201ENST00000330949 ADPGKQ9BRR6 497 aa24.65■■□□□ 1.54
SOX1-201ENST00000330949 C9orf16Q9BUW7 83 aa24.65■■□□□ 1.54
SOX1-201ENST00000330949 RAD21L1Q9H4I0 556 aa24.65■■□□□ 1.54
SOX1-201ENST00000330949 SMARCAD1Q9H4L7 1026 aa24.65■■□□□ 1.54
SOX1-201ENST00000330949 PKD2L2Q9NZM6 624 aa24.65■■□□□ 1.54
SOX1-201ENST00000330949 RIPK3Q9Y572 518 aa24.65■■□□□ 1.54
SOX1-201ENST00000330949 A0A096LPK6 155 aa24.64■■□□□ 1.54
SOX1-201ENST00000330949 RNF103-CHMP3A0A140T963 221 aa24.64■■□□□ 1.54
SOX1-201ENST00000330949 APOA4P06727 396 aa24.64■■□□□ 1.54
SOX1-201ENST00000330949 MATN1P21941 496 aa24.64■■□□□ 1.54
SOX1-201ENST00000330949 GRM5P41594 1212 aa24.64■■□□□ 1.54
SOX1-201ENST00000330949 LIPMQ5VYY2 423 aa24.64■■□□□ 1.54
SOX1-201ENST00000330949 LRRC8EQ6NSJ5 796 aa24.64■■□□□ 1.54
SOX1-201ENST00000330949 GK5Q6ZS86 529 aa24.64■■□□□ 1.54
SOX1-201ENST00000330949 OR2T34Q8NGX1 318 aa24.64■■□□□ 1.54
SOX1-201ENST00000330949 OR2T3Q8NH03 318 aa24.64■■□□□ 1.54
SOX1-201ENST00000330949 CANT1Q8WVQ1 401 aa24.64■■□□□ 1.54
SOX1-201ENST00000330949 MCRS1Q96EZ8 462 aa24.64■■□□□ 1.54
SOX1-201ENST00000330949 NRBF2Q96F24 287 aa24.64■■□□□ 1.54
SOX1-201ENST00000330949 C8orf4Q9NR00 106 aa24.64■■□□□ 1.54
SOX1-201ENST00000330949 GRIA4P48058 902 aa24.64■■□□□ 1.53
SOX1-201ENST00000330949 HLCSP50747 726 aa24.64■■□□□ 1.53
SOX1-201ENST00000330949 MYL6P60660 151 aa24.64■■□□□ 1.53
SOX1-201ENST00000330949 OCA2Q04671 838 aa24.64■■□□□ 1.53
SOX1-201ENST00000330949 TUBA3CQ13748 450 aa24.64■■□□□ 1.53
SOX1-201ENST00000330949 KIZQ2M2Z5 673 aa24.64■■□□□ 1.53
SOX1-201ENST00000330949 C6orf10Q5SRN2 563 aa24.64■■□□□ 1.53
SOX1-201ENST00000330949 SWSAP1Q6NVH7 229 aa24.64■■□□□ 1.53
SOX1-201ENST00000330949 CLEC14AQ86T13 490 aa24.64■■□□□ 1.53
SOX1-201ENST00000330949 MCF2L2Q86YR7 1114 aa24.64■■□□□ 1.53
SOX1-201ENST00000330949 LRRN4Q8WUT4 740 aa24.64■■□□□ 1.53
SOX1-201ENST00000330949 ZBTB45Q96K62 511 aaPredicted RBP24.64■■□□□ 1.53
SOX1-201ENST00000330949 CACNA2D2Q9NY47 1150 aa24.64■■□□□ 1.53
SOX1-201ENST00000330949 CD300AQ9UGN4 299 aa24.64■■□□□ 1.53
SOX1-201ENST00000330949 ZDHHC2Q9UIJ5 367 aa24.64■■□□□ 1.53
SOX1-201ENST00000330949 TOMM70O94826 608 aa24.63■■□□□ 1.53
SOX1-201ENST00000330949 GPD1P21695 349 aa24.63■■□□□ 1.53
SOX1-201ENST00000330949 IDUAP35475 653 aa24.63■■□□□ 1.53
SOX1-201ENST00000330949 LRP8Q14114 963 aa24.63■■□□□ 1.53
SOX1-201ENST00000330949 PCDH19Q8TAB3 1148 aa24.63■■□□□ 1.53
SOX1-201ENST00000330949 RBBP8Q99708 897 aa24.63■■□□□ 1.53
SOX1-201ENST00000330949 WDR12Q9GZL7 423 aaKnown RBP24.63■■□□□ 1.53
SOX1-201ENST00000330949 IL22Q9GZX6 179 aa24.63■■□□□ 1.53
SOX1-201ENST00000330949 POLR3FQ9H1D9 316 aaPredicted RBP24.63■■□□□ 1.53
SOX1-201ENST00000330949 IFT52Q9Y366 437 aa24.63■■□□□ 1.53
SOX1-201ENST00000330949 TFE3P19532 575 aaPredicted RBP24.63■■□□□ 1.53
SOX1-201ENST00000330949 ETFBP38117 255 aa24.63■■□□□ 1.53
SOX1-201ENST00000330949 FAM102AQ5T9C2 384 aaPredicted RBP24.63■■□□□ 1.53
SOX1-201ENST00000330949 KCNT2Q6UVM3 1135 aa24.63■■□□□ 1.53
SOX1-201ENST00000330949 CCDC60Q8IWA6 550 aaPredicted RBP24.63■■□□□ 1.53
SOX1-201ENST00000330949 SEPT9Q9UHD8 586 aaPredicted RBP24.63■■□□□ 1.53
SOX1-201ENST00000330949 ASNSP08243 561 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 HPCAL1P37235 193 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 GRIA3P42263 894 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 SESN2P58004 480 aaPredicted RBP24.62■■□□□ 1.53
SOX1-201ENST00000330949 BOLA3Q53S33 107 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 SH3PXD2AQ5TCZ1 1133 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 RDH11Q8TC12 318 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 ANKMY1Q9P2S6 941 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 EGFRP00533 1210 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 ERVK-10P10266 1014 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 EEF1DP29692 281 aaKnown RBP24.62■■□□□ 1.53
SOX1-201ENST00000330949 LIMK2P53671 638 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 MAPK10P53779 464 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 BAATQ14032 418 aaPredicted RBP24.62■■□□□ 1.53
SOX1-201ENST00000330949 TREML2Q5T2D2 321 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 SCARA5Q6ZMJ2 495 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 EPHX4Q8IUS5 362 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 ARNTL2Q8WYA1 636 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 CERS2Q96G23 380 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 SH3YL1Q96HL8 342 aaPredicted RBP24.62■■□□□ 1.53
SOX1-201ENST00000330949 DHX35Q9H5Z1 703 aaKnown RBP24.62■■□□□ 1.53
SOX1-201ENST00000330949 PDLIM7Q9NR12 457 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 CCM2LQ9NUG4 571 aaPredicted RBP24.62■■□□□ 1.53
SOX1-201ENST00000330949 VPS51Q9UID3 782 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 TRAF6Q9Y4K3 522 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 RSL1D1O76021 490 aaKnown RBP24.62■■□□□ 1.53
SOX1-201ENST00000330949 SEC14L2O76054 403 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 MGAT1P26572 445 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 EPHX2P34913 555 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 OPRL1P41146 370 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 DGKDQ16760 1214 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 IFNLR1Q8IU57 520 aaPredicted RBP24.62■■□□□ 1.53
SOX1-201ENST00000330949 TTC30BQ8N4P2 665 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 ABHD11Q8NFV4 315 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 FBXL20Q96IG2 436 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 MUC3BQ9H195 1237 aa24.62■■□□□ 1.53
SOX1-201ENST00000330949 PIGRP01833 764 aa24.61■■□□□ 1.53
SOX1-201ENST00000330949 POLBP06746 335 aa24.61■■□□□ 1.53
SOX1-201ENST00000330949 MLLT10P55197 1068 aa24.61■■□□□ 1.53
SOX1-201ENST00000330949 PERM1Q5SV97 790 aa24.61■■□□□ 1.53
SOX1-201ENST00000330949 RDM1Q8NG50 284 aa24.61■■□□□ 1.53
SOX1-201ENST00000330949 DCPSQ96C86 337 aaKnown RBP24.61■■□□□ 1.53
SOX1-201ENST00000330949 GLT1D1Q96MS3 346 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms