RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 CCNDBP1O95273 360 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 ALBP02768 609 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 GALNTL6Q49A17 601 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 ZFP1Q6P2D0 407 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 RBFAQ8N0V3 343 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 OR52K1Q8NGK4 314 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 C7orf43Q8WVR3 580 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 SEMA3CQ99985 751 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 ATAD3AQ9NVI7 634 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 FBXL21Q9UKT6 434 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 ARL5CA6NH57 179 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 NCF1BA6NI72 391 aaPredicted RBP11.55□□□□□ -0.56
COL4A5-201ENST00000328300 NCF1CA8MVU1 366 aaPredicted RBP11.55□□□□□ -0.56
COL4A5-201ENST00000328300 SLURP2P0DP57 97 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 PCNAP12004 261 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 NCF1P14598 390 aaPredicted RBP11.55□□□□□ -0.56
COL4A5-201ENST00000328300 PCDHB18PQ96TA0 734 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 CORO2BQ9UQ03 480 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 ABHD14A-ACY1A0A1B0GW23 586 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 PDZK1P1A8MUH7 402 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 BTN3A1O00481 513 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 MAP2K7O14733 419 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 DDX3YO15523 660 aaKnown RBP11.54□□□□□ -0.56
COL4A5-201ENST00000328300 ZSCAN9O15535 394 aaPredicted RBP11.54□□□□□ -0.56
COL4A5-201ENST00000328300 PBLDP30039 288 aaPredicted RBP11.54□□□□□ -0.56
COL4A5-201ENST00000328300 THOP1P52888 689 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 IFNEQ86WN2 208 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 BEND7Q8N7W2 519 aaPredicted RBP11.54□□□□□ -0.56
COL4A5-201ENST00000328300 OXNAD1Q96HP4 312 aaPredicted RBP11.54□□□□□ -0.56
COL4A5-201ENST00000328300 RMDN2Q96LZ7 410 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 C11orf84Q9BUA3 381 aaPredicted RBP11.54□□□□□ -0.56
COL4A5-201ENST00000328300 DCLRE1BQ9H816 532 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 TRPM3Q9HCF6 1732 aaPredicted RBP11.54□□□□□ -0.56
COL4A5-201ENST00000328300 NOL4O94818 638 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 GJB6O95452 261 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 NDUFV1P49821 464 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 DDX39BQ13838 428 aaKnown RBP11.54□□□□□ -0.56
COL4A5-201ENST00000328300 RFTN1Q14699 578 aaPredicted RBP11.54□□□□□ -0.56
COL4A5-201ENST00000328300 CERS6Q6ZMG9 384 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 NTAN1Q96AB6 310 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 FAM120BQ96EK7 910 aaKnown RBP11.54□□□□□ -0.56
COL4A5-201ENST00000328300 TTYH3Q9C0H2 523 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 OSGEPL1Q9H4B0 414 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 MID1IP1Q9NPA3 183 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 HTR1BP28222 390 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 LILRA4P59901 499 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 RAB10P61026 200 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 AP1S1P61966 158 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 MRPS35P82673 323 aaKnown RBP11.54□□□□□ -0.56
COL4A5-201ENST00000328300 PRKCZQ05513 592 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 CRHR2Q13324 411 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 MTM1Q13496 603 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 FRG1Q14331 258 aaKnown RBP11.54□□□□□ -0.56
COL4A5-201ENST00000328300 TEX44Q53QW1 395 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 ZC3H12BQ5HYM0 836 aaKnown RBP11.54□□□□□ -0.56
COL4A5-201ENST00000328300 P3H2Q8IVL5 708 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 CEP44Q9C0F1 390 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 CYP4F12Q9HCS2 524 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 CNTN3Q9P232 1028 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 DHX15O43143 795 aaKnown RBP11.54□□□□□ -0.56
COL4A5-201ENST00000328300 ATG7O95352 703 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 GJB1P08034 283 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 GABRR2P28476 465 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 OVGP1Q12889 678 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 GNA13Q14344 377 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 DMC1Q14565 340 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 CCDC33Q8N5R6 958 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 METTL6Q8TCB7 284 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 WFIKKN2Q8TEU8 576 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 CSPG4P5Q96PW8 444 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 ACOX2Q99424 681 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 BBS2Q9BXC9 721 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 ASB8Q9H765 288 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 GGT7Q9UJ14 662 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 LOC100653049A0A140TA62 436 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 KRT34O76011 436 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 KCNE1P15382 129 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 SLC5A3P53794 718 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 RPL7AP62424 266 aaKnown RBP11.54□□□□□ -0.56
COL4A5-201ENST00000328300 SPIRE1Q08AE8 756 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 TCEA2Q15560 299 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 CNKSR3Q6P9H4 555 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 SERPINA13PQ6UXR4 307 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 MYO19Q96H55 970 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 CROTQ9UKG9 612 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 NDUFAF1Q9Y375 327 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 A0A1W2PQH9 124 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 ACSL4O60488 711 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 SLC2A4P14672 509 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 PTPN2P17706 415 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 FMO4P31512 558 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 TAS2R40P59535 323 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 TAF10Q12962 218 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 LPCAT2Q7L5N7 544 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 TMEM132CQ8N3T6 1108 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 ACTRT2Q8TDY3 377 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 KCTD13Q8WZ19 329 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 ZNF75CPQ92670 426 aaPredicted RBP11.54□□□□□ -0.56
COL4A5-201ENST00000328300 DLG3Q92796 817 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 PPP3R2Q96LZ3 170 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms