RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 DNMT3BQ9UBC3 853 aaKnown RBP18.71■□□□□ 0.59
USP39-201ENST00000323701 TBC1D30Q9Y2I9 924 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 PRRC2BQ5JSZ5 2229 aaKnown RBP18.7■□□□□ 0.58
USP39-201ENST00000323701 TBL1XO60907 577 aa18.7■□□□□ 0.58
USP39-201ENST00000323701 NMBRP28336 390 aa18.7■□□□□ 0.58
USP39-201ENST00000323701 POU6F1Q14863 301 aa18.7■□□□□ 0.58
USP39-201ENST00000323701 SH2D5Q6ZV89 423 aa18.7■□□□□ 0.58
USP39-201ENST00000323701 BBS7Q8IWZ6 715 aa18.7■□□□□ 0.58
USP39-201ENST00000323701 ZNF669Q96BR6 464 aaPredicted RBP18.7■□□□□ 0.58
USP39-201ENST00000323701 EPN3Q9H201 632 aa18.7■□□□□ 0.58
USP39-201ENST00000323701 MAGEH1Q9H213 219 aa18.7■□□□□ 0.58
USP39-201ENST00000323701 SAMD15Q9P1V8 674 aa18.7■□□□□ 0.58
USP39-201ENST00000323701 YBX2Q9Y2T7 364 aaKnown RBP18.7■□□□□ 0.58
USP39-201ENST00000323701 SPTBN5Q9NRC6 3674 aaKnown RBP18.69■□□□□ 0.58
USP39-201ENST00000323701 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.69■□□□□ 0.58
USP39-201ENST00000323701 TYROBPO43914 113 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 CLASP2O75122 1294 aaKnown RBP18.69■□□□□ 0.58
USP39-201ENST00000323701 RPA3P35244 121 aaPredicted RBP18.69■□□□□ 0.58
USP39-201ENST00000323701 RGRP47804 291 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 GEMP55040 296 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 WDR4P57081 412 aaKnown RBP18.69■□□□□ 0.58
USP39-201ENST00000323701 SLC7A9P82251 487 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 TNK2Q07912 1038 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 NR1H3Q13133 447 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 ZNF177Q13360 481 aaPredicted RBP18.69■□□□□ 0.58
USP39-201ENST00000323701 ANKRD20A4Q4UJ75 823 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 RNF219Q5W0B1 726 aaPredicted RBP18.69■□□□□ 0.58
USP39-201ENST00000323701 RBM23Q86U06 439 aaKnown RBP18.69■□□□□ 0.58
USP39-201ENST00000323701 TTC17Q96AE7 1141 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 CLEC4EQ9ULY5 219 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 IKBKGQ9Y6K9 419 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 GOLGA8TH3BQL2 631 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 C1RP00736 705 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 POLBP06746 335 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 RHOCP08134 193 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 MZF1P28698 734 aaPredicted RBP18.69■□□□□ 0.58
USP39-201ENST00000323701 CYS1Q717R9 158 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 CHST9Q7L1S5 443 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 ELMOD1Q8N336 334 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 SLC25A41Q8N5S1 370 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 GDAP1Q8TB36 358 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 BCAS4Q8TDM0 211 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 TADA1Q96BN2 335 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 CENPTQ96BT3 561 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 PLK2Q9NYY3 685 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 GRID1Q9ULK0 1009 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 HCFC2Q9Y5Z7 792 aa18.69■□□□□ 0.58
USP39-201ENST00000323701 ILVBLA1L0T0 632 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 TRIM49D1C9J1S8 452 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 SNAP91O60641 907 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 CD160O95971 181 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 NPY2RP49146 381 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 TMCO4Q5TGY1 634 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 LINGO4Q6UY18 593 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 ADGRD2Q7Z7M1 963 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 LINC00523Q86TU6 105 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 CARNMT1Q8N4J0 409 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 DENND1AQ8TEH3 1009 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 SMC6Q96SB8 1091 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 AGAP2Q99490 1192 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 SEMA3CQ99985 751 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 NAT9Q9BTE0 207 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 FSD1LQ9BXM9 530 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 ACE2Q9BYF1 805 aaPredicted RBP18.68■□□□□ 0.58
USP39-201ENST00000323701 IL22Q9GZX6 179 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 FAM107BQ9H098 131 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 MTIF3Q9H2K0 278 aaKnown RBP18.68■□□□□ 0.58
USP39-201ENST00000323701 ATP13A1Q9HD20 1204 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 CBX4O00257 560 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 KDELR3O43731 214 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 CDC25CP30307 473 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 MAGEA10P43363 369 aaPredicted RBP18.68■□□□□ 0.58
USP39-201ENST00000323701 UBE3AQ05086 875 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 TEAD2Q15562 447 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 SLC1A5Q15758 541 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 RNF135Q8IUD6 432 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 CCNJLQ8IV13 435 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 FAM217AQ8IXS0 508 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 CERS2Q96G23 380 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 EXOC2Q96KP1 924 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 HTATIP2Q9BUP3 242 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 SOX13Q9UN79 622 aa18.68■□□□□ 0.58
USP39-201ENST00000323701 TRAV19A0A0A6YYK7 116 aa18.67■□□□□ 0.58
USP39-201ENST00000323701 FAM237BA0A1B0GVD1 139 aa18.67■□□□□ 0.58
USP39-201ENST00000323701 FAM47DPA6NHR8 397 aa18.67■□□□□ 0.58
USP39-201ENST00000323701 LEFTY2O00292 366 aa18.67■□□□□ 0.58
USP39-201ENST00000323701 PSMD3O43242 534 aa18.67■□□□□ 0.58
USP39-201ENST00000323701 USP1O94782 785 aa18.67■□□□□ 0.58
USP39-201ENST00000323701 RHOP08100 348 aa18.67■□□□□ 0.58
USP39-201ENST00000323701 ARF5P84085 180 aa18.67■□□□□ 0.58
USP39-201ENST00000323701 MPP3Q13368 585 aa18.67■□□□□ 0.58
USP39-201ENST00000323701 MSLNQ13421 630 aaPredicted RBP18.67■□□□□ 0.58
USP39-201ENST00000323701 SPANXN3Q5MJ09 141 aa18.67■□□□□ 0.58
USP39-201ENST00000323701 MROH9Q5TGP6 573 aa18.67■□□□□ 0.58
USP39-201ENST00000323701 HTR3DQ70Z44 454 aa18.67■□□□□ 0.58
USP39-201ENST00000323701 SETD3Q86TU7 594 aaPredicted RBP18.67■□□□□ 0.58
USP39-201ENST00000323701 TMA16Q96EY4 203 aaKnown RBP18.67■□□□□ 0.58
USP39-201ENST00000323701 ZNF317Q96PQ6 595 aaPredicted RBP18.67■□□□□ 0.58
USP39-201ENST00000323701 KIFC1Q9BW19 673 aa18.67■□□□□ 0.58
USP39-201ENST00000323701 SLC2A6Q9UGQ3 507 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms