RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 GRM6O15303 877 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 FAM107AO95990 144 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 CAMK1Q14012 370 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 KDELC1Q6UW63 502 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 SERBP1Q8NC51 408 aaKnown RBP eCLIP26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 DENND1AQ8TEH3 1009 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 CHMP6Q96FZ7 201 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 ZNF180Q9UJW8 692 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 CLDN11O75508 207 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 RHOCP08134 193 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 NPY2RP49146 381 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 CLCN4P51793 760 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 FSCBQ5H9T9 825 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 SPANXN3Q5MJ09 141 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 C9orf50Q5SZB4 431 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 LRRC34Q8IZ02 419 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 BANPQ8N9N5 519 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 PHOSPHO2Q8TCD6 241 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 FATE1Q969F0 183 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 AGAP2Q99490 1192 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 SLC17A7Q9P2U7 560 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 IRAK3Q9Y616 596 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 MYLKQ15746 1914 aa26.78■■□□□ 1.88
TM6SF1-202ENST00000322019 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 PSMD3O43242 534 aa26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 ZNF177Q13360 481 aaPredicted RBP26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 CXorf57Q6NSI4 855 aaKnown RBP26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 ARRDC2Q8TBH0 407 aa26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 ZFATQ9P243 1243 aa26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 A0A1B0GVM2 712 aa26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 TCAF2A6NFQ2 919 aa26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 TBL1XO60907 577 aa26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 KRT37O76014 449 aa26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 USP1O94782 785 aa26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 SNRPAP09012 282 aaKnown RBP26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 GBP2P32456 591 aaPredicted RBP26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 TMCO4Q5TGY1 634 aa26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 RANBP10Q6VN20 620 aa26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 SH2D5Q6ZV89 423 aa26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 CYS1Q717R9 158 aa26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 TCEAL4Q96EI5 215 aa26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 MAGEH1Q9H213 219 aa26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 SOX13Q9UN79 622 aa26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 SMG5Q9UPR3 1016 aaKnown RBP26.77■■□□□ 1.88
TM6SF1-202ENST00000322019 CEP290O15078 2479 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 TRANK1O15050 2925 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 CHD5Q8TDI0 1954 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 ASMTLO95671 621 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 VIMP08670 466 aaKnown RBP26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 DRD4P21917 467 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 ABCG1P45844 678 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 MGAT5Q09328 741 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 ZNF235Q14590 738 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 HSP90AA5PQ58FG0 334 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 PPM1LQ5SGD2 360 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 RNF219Q5W0B1 726 aaPredicted RBP26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 PACS1Q6VY07 963 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 MARK2Q7KZI7 788 aaKnown RBP26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 RNF135Q8IUD6 432 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 CARNMT1Q8N4J0 409 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 TCP10LQ8TDR4 215 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 EXOC2Q96KP1 924 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 SEMA3CQ99985 751 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 ATP13A1Q9HD20 1204 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 CFAP97Q9P2B7 532 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 LZTS1Q9Y250 596 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 REV3LO60673 3130 aa26.76■■□□□ 1.87
TM6SF1-202ENST00000322019 FAM237BA0A1B0GVD1 139 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 TCP11X1B4DZS4 312 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 CBX4O00257 560 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 C1RP00736 705 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 MPP3Q13368 585 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 Q6ZNB5 142 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 ELMOD1Q8N336 334 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 WFDC5Q8TCV5 224 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 CKAP2Q8WWK9 683 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 CDKL2Q92772 493 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 ATXN7L3BQ96GX2 97 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 MUC3BQ9H195 1237 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 CCDC134Q9H6E4 229 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 MAN1C1Q9NR34 630 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 ASAH2Q9NR71 780 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 SLC2A6Q9UGQ3 507 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 STOML2Q9UJZ1 356 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 FAM169AQ9Y6X4 670 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 PER2O15055 1255 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 RFPL1O75677 317 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 EPCAMP16422 314 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 FOXN2P32314 431 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 OXCT1P55809 520 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 CDHR3Q6ZTQ4 885 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 SPOCK2Q92563 424 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 SLC46A2Q9BY10 475 aa26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 C20orf96Q9NUD7 363 aaPredicted RBP26.75■■□□□ 1.87
TM6SF1-202ENST00000322019 TOP3BO95985 862 aaKnown RBP26.74■■□□□ 1.87
TM6SF1-202ENST00000322019 ADRA1DP25100 572 aa26.74■■□□□ 1.87
TM6SF1-202ENST00000322019 ZKSCAN8Q15776 578 aaPredicted RBP26.74■■□□□ 1.87
TM6SF1-202ENST00000322019 ZNF697Q5TEC3 545 aa26.74■■□□□ 1.87
TM6SF1-202ENST00000322019 LVRNQ6Q4G3 990 aa26.74■■□□□ 1.87
TM6SF1-202ENST00000322019 LINGO4Q6UY18 593 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms