RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 DDX3YO15523 660 aaKnown RBP8□□□□□ -1.13
CDC42-201ENST00000315554 ZBTB24O43167 697 aaPredicted RBP8□□□□□ -1.13
CDC42-201ENST00000315554 PRAMEF11O60813 436 aa8□□□□□ -1.13
CDC42-201ENST00000315554 ZNF821O75541 412 aaPredicted RBP8□□□□□ -1.13
CDC42-201ENST00000315554 TMCC1O94876 653 aa8□□□□□ -1.13
CDC42-201ENST00000315554 ZRANB2O95218 330 aaKnown RBP eCLIP8□□□□□ -1.13
CDC42-201ENST00000315554 AVPP01185 164 aa8□□□□□ -1.13
CDC42-201ENST00000315554 BCKDHBP21953 392 aa8□□□□□ -1.13
CDC42-201ENST00000315554 CTNNA2P26232 953 aa8□□□□□ -1.13
CDC42-201ENST00000315554 GKP32189 559 aa8□□□□□ -1.13
CDC42-201ENST00000315554 CDKN2BP42772 138 aa8□□□□□ -1.13
CDC42-201ENST00000315554 RPS14P62263 151 aaKnown RBP8□□□□□ -1.13
CDC42-201ENST00000315554 SLC10A2Q12908 348 aaPredicted RBP8□□□□□ -1.13
CDC42-201ENST00000315554 CYTH1Q15438 398 aa8□□□□□ -1.13
CDC42-201ENST00000315554 LIAT1Q6ZQX7 453 aa8□□□□□ -1.13
CDC42-201ENST00000315554 WDR5BQ86VZ2 330 aa8□□□□□ -1.13
CDC42-201ENST00000315554 LONP2Q86WA8 852 aa8□□□□□ -1.13
CDC42-201ENST00000315554 RASSF3Q86WH2 238 aa8□□□□□ -1.13
CDC42-201ENST00000315554 MMAAQ8IVH4 418 aaKnown RBP8□□□□□ -1.13
CDC42-201ENST00000315554 REXO1L1PQ8IX06 675 aa8□□□□□ -1.13
CDC42-201ENST00000315554 KATNAL2Q8IYT4 538 aa8□□□□□ -1.13
CDC42-201ENST00000315554 ATPAF2Q8N5M1 289 aa8□□□□□ -1.13
CDC42-201ENST00000315554 CAMKK1Q8N5S9 505 aa8□□□□□ -1.13
CDC42-201ENST00000315554 DEFB119Q8N690 84 aa8□□□□□ -1.13
CDC42-201ENST00000315554 PLD5Q8N7P1 536 aa8□□□□□ -1.13
CDC42-201ENST00000315554 GRIN3AQ8TCU5 1115 aa8□□□□□ -1.13
CDC42-201ENST00000315554 SIPA1Q96FS4 1042 aa8□□□□□ -1.13
CDC42-201ENST00000315554 MRGPRX1Q96LB2 322 aa8□□□□□ -1.13
CDC42-201ENST00000315554 FAM129BQ96TA1 746 aa8□□□□□ -1.13
CDC42-201ENST00000315554 RETREG1Q9H6L5 497 aa8□□□□□ -1.13
CDC42-201ENST00000315554 SP110Q9HB58 689 aa8□□□□□ -1.13
CDC42-201ENST00000315554 PDFQ9HBH1 243 aa8□□□□□ -1.13
CDC42-201ENST00000315554 ZSCAN32Q9NX65 697 aa8□□□□□ -1.13
CDC42-201ENST00000315554 SAE1Q9UBE0 346 aaPredicted RBP8□□□□□ -1.13
CDC42-201ENST00000315554 UBA2Q9UBT2 640 aaPredicted RBP8□□□□□ -1.13
CDC42-201ENST00000315554 IPO11Q9UI26 975 aaKnown RBP8□□□□□ -1.13
CDC42-201ENST00000315554 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8□□□□□ -1.13
CDC42-201ENST00000315554 PCDHA3Q9Y5H8 950 aa8□□□□□ -1.13
CDC42-201ENST00000315554 HEY1Q9Y5J3 304 aa8□□□□□ -1.13
CDC42-201ENST00000315554 hCG_1818297A0A087WSY0 165 aa8□□□□□ -1.13
CDC42-201ENST00000315554 APOL1O14791 398 aa8□□□□□ -1.13
CDC42-201ENST00000315554 MID1O15344 667 aa8□□□□□ -1.13
CDC42-201ENST00000315554 INSIG1O15503 277 aa8□□□□□ -1.13
CDC42-201ENST00000315554 CST8O60676 142 aa8□□□□□ -1.13
CDC42-201ENST00000315554 GJB3O75712 270 aa8□□□□□ -1.13
CDC42-201ENST00000315554 IL1BP01584 269 aa8□□□□□ -1.13
CDC42-201ENST00000315554 CTSLP07711 333 aa8□□□□□ -1.13
CDC42-201ENST00000315554 PYGMP11217 842 aa8□□□□□ -1.13
CDC42-201ENST00000315554 PECAM1P16284 738 aaPredicted RBP8□□□□□ -1.13
CDC42-201ENST00000315554 SERPINB6P35237 376 aa8□□□□□ -1.13
CDC42-201ENST00000315554 RGRP47804 291 aa8□□□□□ -1.13
CDC42-201ENST00000315554 PEX5P50542 639 aa8□□□□□ -1.13
CDC42-201ENST00000315554 RWDD2BP57060 319 aa8□□□□□ -1.13
CDC42-201ENST00000315554 RHOAP61586 193 aa8□□□□□ -1.13
CDC42-201ENST00000315554 PAFAH1B3Q15102 231 aaKnown RBP8□□□□□ -1.13
CDC42-201ENST00000315554 E2F5Q15329 346 aa8□□□□□ -1.13
CDC42-201ENST00000315554 ZNF528Q3MIS6 628 aa8□□□□□ -1.13
CDC42-201ENST00000315554 ZNF776Q68DI1 518 aaPredicted RBP8□□□□□ -1.13
CDC42-201ENST00000315554 SLC9A4Q6AI14 798 aa8□□□□□ -1.13
CDC42-201ENST00000315554 DPY19L3Q6ZPD9 716 aa8□□□□□ -1.13
CDC42-201ENST00000315554 PRR23BQ6ZRT6 265 aa8□□□□□ -1.13
CDC42-201ENST00000315554 CEP68Q76N32 757 aa8□□□□□ -1.13
CDC42-201ENST00000315554 RCOR2Q8IZ40 523 aa8□□□□□ -1.13
CDC42-201ENST00000315554 SYCE1Q8N0S2 351 aa8□□□□□ -1.13
CDC42-201ENST00000315554 C17orf53Q8N3J3 647 aaPredicted RBP8□□□□□ -1.13
CDC42-201ENST00000315554 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8□□□□□ -1.13
CDC42-201ENST00000315554 RNF10Q8N5U6 811 aaKnown RBP8□□□□□ -1.13
CDC42-201ENST00000315554 LZTR1Q8N653 840 aa8□□□□□ -1.13
CDC42-201ENST00000315554 KDM1BQ8NB78 822 aa8□□□□□ -1.13
CDC42-201ENST00000315554 OR2A12Q8NGT7 310 aa8□□□□□ -1.13
CDC42-201ENST00000315554 EXD1Q8NHP7 514 aa8□□□□□ -1.13
CDC42-201ENST00000315554 GANCQ8TET4 914 aa8□□□□□ -1.13
CDC42-201ENST00000315554 PRCCQ92733 491 aaPredicted RBP8□□□□□ -1.13
CDC42-201ENST00000315554 RBM41Q96IZ5 413 aaKnown RBP8□□□□□ -1.13
CDC42-201ENST00000315554 CALR3Q96L12 384 aaKnown RBP8□□□□□ -1.13
CDC42-201ENST00000315554 PRRX2Q99811 253 aa8□□□□□ -1.13
CDC42-201ENST00000315554 FAM118BQ9BPY3 351 aa8□□□□□ -1.13
CDC42-201ENST00000315554 PRR14Q9BWN1 585 aa8□□□□□ -1.13
CDC42-201ENST00000315554 ZDHHC6Q9H6R6 413 aa8□□□□□ -1.13
CDC42-201ENST00000315554 DONSONQ9NYP3 566 aa8□□□□□ -1.13
CDC42-201ENST00000315554 DTLQ9NZJ0 730 aa8□□□□□ -1.13
CDC42-201ENST00000315554 LHX3Q9UBR4 397 aa8□□□□□ -1.13
CDC42-201ENST00000315554 SERGEFQ9UGK8 458 aa8□□□□□ -1.13
CDC42-201ENST00000315554 SARDHQ9UL12 918 aa8□□□□□ -1.13
CDC42-201ENST00000315554 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8□□□□□ -1.13
CDC42-201ENST00000315554 NYNRINQ9P2P1 1898 aaKnown RBP7.99□□□□□ -1.13
CDC42-201ENST00000315554 A0A1W2PP55 124 aa7.99□□□□□ -1.13
CDC42-201ENST00000315554 TARSL2A2RTX5 802 aaKnown RBP7.99□□□□□ -1.13
CDC42-201ENST00000315554 CCDC66A2RUB6 948 aa7.99□□□□□ -1.13
CDC42-201ENST00000315554 KRIT1O00522 736 aa7.99□□□□□ -1.13
CDC42-201ENST00000315554 MUSKO15146 869 aa7.99□□□□□ -1.13
CDC42-201ENST00000315554 MAFKO60675 156 aa7.99□□□□□ -1.13
CDC42-201ENST00000315554 RNASEH1O60930 286 aaKnown RBP7.99□□□□□ -1.13
CDC42-201ENST00000315554 RPP40O75818 363 aaKnown RBP7.99□□□□□ -1.13
CDC42-201ENST00000315554 DNTTP04053 509 aa7.99□□□□□ -1.13
CDC42-201ENST00000315554 ACADMP11310 421 aa7.99□□□□□ -1.13
CDC42-201ENST00000315554 HOXA6P31267 233 aa7.99□□□□□ -1.13
CDC42-201ENST00000315554 CHRNA3P32297 505 aa7.99□□□□□ -1.13
CDC42-201ENST00000315554 SLC8A1P32418 973 aa7.99□□□□□ -1.13
CDC42-201ENST00000315554 RECQLP46063 649 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms