RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 OR14C36Q8NHC7 312 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 SPACA7Q96KW9 195 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 ZNF830Q96NB3 372 aaPredicted RBP12.26□□□□□ -0.45
SCFD1-201ENST00000311943 SMIM14Q96QK8 99 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 MYOCQ99972 504 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 OMDQ99983 421 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 ORAI3Q9BRQ5 295 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 HECAQ9UBI9 543 aaPredicted RBP12.26□□□□□ -0.45
SCFD1-201ENST00000311943 KNL1Q8NG31 2342 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 SPTBN4Q9H254 2564 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 CEP250Q9BV73 2442 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 SHROOM3Q8TF72 1996 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 MACROD2A1Z1Q3 448 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 LRRD1A4D1F6 860 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 GOLGA8CPA6NN73 597 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 KRIT1O00522 736 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 NDUFS2O75306 463 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 ZNF217O75362 1048 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 MTA2O94776 668 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 FSBPO95073 299 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 IGHV4-34P06331 123 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 KDELR1P24390 212 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 DYNLT1P63172 113 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 ACAP1Q15027 740 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 ANKRD20A8PQ5CZ79 823 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 AGBL4Q5VU57 503 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 RETSATQ6NUM9 610 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 ZSWIM9Q86XI8 627 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 CCDC170Q8IYT3 715 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 KDM1BQ8NB78 822 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 OR8D1Q8WZ84 308 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 CEP41Q9BYV8 373 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 C10orf88Q9H8K7 445 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 GMEB2Q9UKD1 530 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.25□□□□□ -0.45
SCFD1-201ENST00000311943 LNP1A1A4G5 178 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 H3BRJ5 948 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 FGF10O15520 208 aaPredicted RBP12.25□□□□□ -0.45
SCFD1-201ENST00000311943 ZBTB24O43167 697 aaPredicted RBP12.25□□□□□ -0.45
SCFD1-201ENST00000311943 PRAMEF11O60813 436 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 IGLV3-19P01714 112 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 CYLC1P35663 651 aaPredicted RBP12.25□□□□□ -0.45
SCFD1-201ENST00000311943 ARL4AP40617 200 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 ADPRHP54922 357 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 SPA17Q15506 151 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 CARD16Q5EG05 197 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 LYSMD4Q5XG99 296 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 MFSD7Q6UXD7 560 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 ZNF783Q6ZMS7 281 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 RHOT2Q8IXI1 618 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 ZCCHC9Q8N567 271 aaKnown RBP12.25□□□□□ -0.45
SCFD1-201ENST00000311943 TPCN2Q8NHX9 752 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 FAM71BQ8TC56 605 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 TEKT4Q8WW24 435 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 BTBD1Q9H0C5 482 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 IPO11Q9UI26 975 aaKnown RBP12.25□□□□□ -0.45
SCFD1-201ENST00000311943 PILRBQ9UKJ0 227 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.25□□□□□ -0.45
SCFD1-201ENST00000311943 PLXNA2O75051 1894 aa12.25□□□□□ -0.45
SCFD1-201ENST00000311943 METTL12A8MUP2 240 aa12.24□□□□□ -0.45
SCFD1-201ENST00000311943 SPINT1O43278 529 aa12.24□□□□□ -0.45
SCFD1-201ENST00000311943 MAFKO60675 156 aa12.24□□□□□ -0.45
SCFD1-201ENST00000311943 SEMA4FO95754 770 aa12.24□□□□□ -0.45
SCFD1-201ENST00000311943 UGT2B4P06133 528 aa12.24□□□□□ -0.45
SCFD1-201ENST00000311943 DESP17661 470 aa12.24□□□□□ -0.45
SCFD1-201ENST00000311943 PI4KAP42356 2102 aa12.24□□□□□ -0.45
SCFD1-201ENST00000311943 HADHQ16836 314 aaKnown RBP12.24□□□□□ -0.45
SCFD1-201ENST00000311943 PIP5KL1Q5T9C9 394 aa12.24□□□□□ -0.45
SCFD1-201ENST00000311943 TMCO3Q6UWJ1 677 aa12.24□□□□□ -0.45
SCFD1-201ENST00000311943 PRR23CQ6ZRP0 262 aa12.24□□□□□ -0.45
SCFD1-201ENST00000311943 PARS2Q7L3T8 475 aaKnown RBP12.24□□□□□ -0.45
SCFD1-201ENST00000311943 CYP2U1Q7Z449 544 aa12.24□□□□□ -0.45
SCFD1-201ENST00000311943 METTL3Q86U44 580 aaKnown RBP12.24□□□□□ -0.45
SCFD1-201ENST00000311943 FUBP1Q96AE4 644 aaKnown RBP12.24□□□□□ -0.45
SCFD1-201ENST00000311943 FAM118BQ9BPY3 351 aa12.24□□□□□ -0.45
SCFD1-201ENST00000311943 FZD3Q9NPG1 666 aa12.24□□□□□ -0.45
SCFD1-201ENST00000311943 IL36AQ9UHA7 158 aa12.24□□□□□ -0.45
SCFD1-201ENST00000311943 WDFY3Q8IZQ1 3526 aa12.24□□□□□ -0.45
SCFD1-201ENST00000311943 GRID2IPA4D2P6 1211 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 RHOBTB1O94844 696 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 KRT1P04264 644 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 CFIP05156 583 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 ABL2P42684 1182 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 NDST2P52849 883 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 YBEYP58557 167 aaPredicted RBP12.23□□□□□ -0.45
SCFD1-201ENST00000311943 RHOAP61586 193 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 BNC1Q01954 994 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 PARP15Q460N3 678 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 TRIM61Q5EBN2 209 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 ACBD5Q5T8D3 534 aaPredicted RBP12.23□□□□□ -0.45
SCFD1-201ENST00000311943 KAZNQ674X7 775 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 SEL1L3Q68CR1 1132 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 CAMK1DQ8IU85 385 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 PLD5Q8N7P1 536 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 OR2AP1Q8NGE2 309 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 HAUS1Q96CS2 278 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 RMDN1Q96DB5 314 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 KLHL32Q96NJ5 620 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 IL21RQ9HBE5 538 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 IMPACTQ9P2X3 320 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms